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AT3G45040.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.990
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphatidate cytidylyltransferase family protein
Curator
Summary (TAIR10)
Encodes a putative dolichol kinase.
Computational
Description (TAIR10)
phosphatidate cytidylyltransferase family protein; FUNCTIONS IN: phosphatidate cytidylyltransferase activity, dolichol kinase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 410 Blast hits to 408 proteins in 217 species: Archae - 14; Bacteria - 44; Metazoa - 111; Fungi - 131; Plants - 43; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G45040-MONOMEREC:2.7.1.108eggNOG:COG0170eggNOG:KOG2468
EMBL:AL353992EMBL:AY074371EMBL:CP002686EnsemblPlants:AT3G45040
EnsemblPlants:AT3G45040.1entrez:823639GeneID:823639Genevisible:F4J4C8
GO:GO:0004168GO:GO:0005783GO:GO:0005789GO:GO:0006486
GO:GO:0009555GO:GO:0010483GO:GO:0016021Gramene:AT3G45040.1
hmmpanther:PTHR13205hmmpanther:PTHR13205:SF15HOGENOM:HOG000006051InParanoid:F4J4C8
InterPro:IPR032974iPTMnet:F4J4C8KEGG:ath:AT3G45040KO:K00902
OMA:YLSVIMSPANTHER:PTHR13205PaxDb:F4J4C8PIR:T48980
PRIDE:F4J4C8PRO:PR:F4J4C8ProteinModelPortal:F4J4C8Proteomes:UP000006548
Reactome:R-ATH-446199RefSeq:NP_190090.2STRING:3702.AT3G45040.1TAIR:AT3G45040
TMHMM:TMhelixUniGene:At.43679UniProt:F4J4C8
Coordinates (TAIR10) chr3:-:16472801..16475702
Molecular Weight (calculated) 63139.90 Da
IEP (calculated) 9.21
GRAVY (calculated) 0.78
Length 569 amino acids
Sequence (TAIR10)
(BLAST)
001: MKTTATSFVT GERVVVFVVV SRILLSLPLS LISHGFSLFL LSLSAFLVEI RVETSPFLLS HFSSRRGASS GILLGAVTLP SVMISKLVQL SRAISIHEAE
101: QDELAHVTMQ YWAASASCCA ILIYLSVIMS QVRKDESLSS SSIWLTRVSL TGTVLYGVAC FVSLSMISHT GLNTSLKMLW MLFHGLAAVK LIRHLLCTFP
201: SCASIGEALL VTSGLVLYFG DFLACTIAKI FEKLIPVDLV SISYGIKRTE TGIIVQGLLL GLLLFPMVFR FVLHIYESSL RKRDARQRNC SDAAKSVLFF
301: VSLLFFMVVA VPSWMQFVHD FNQHPFLWVL TFVFSEPLKR LSLCIYWILL IVVSVSRFYN ISRSSKVERI LLRKYYHLMA VLMFLPALVL QPKFLDLAFG
401: AALAVFVALE IIRIWRIQPL GEPLHQFMNA FTDHRDSEHL IVSHFSLLLG CALPIWMSSG FNDRALSPFA GILSLGIGDT MASMVGHKYG VLRWSKTGKK
501: TVEGTAAGIT SMMAVCFVLV PILASMGYIL SQGWWSLLVA VTATGMLEAY TAQLDNAFIP LVFYSLLCL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)