AT3G44690.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:16230685..16234215 | ||||||||||||||||||||
| Molecular Weight (calculated) | 137967.00 Da | ||||||||||||||||||||
| IEP (calculated) | 5.73 | ||||||||||||||||||||
| GRAVY (calculated) | -1.26 | ||||||||||||||||||||
| Length | 1176 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MLMRERIRDS LPQRLSSPSP TSDRDGNESS MIKLGDVSSR SDKIDMVSHR VDEQKHDIDG IRQDSDLYDV EIQRSTEFSN KDRREEEERD DERYTKHYHL 0101: QEDSGKRYPE SSRFITSHDH PSRLSDEPKP SRFITSHDDE YSPSHGKINV LLRNDKTKRL ESISRECSDS SRHSEDGRER DTYRYESSPL SQVGSSVADF 0201: QDESSRLVSS DSRSFGCVND SDERRRHDYD GNLCVPQVLR TRRVDDYVGR NSPRDQQVRD LSRGDHDSPV VSRCVKEIVD EARDNYHIGS DIAMREFPSV 0301: RHEVNNVARE NDLFMQRRGS LSKSHVCGSN IADVDAADTH LEFSRKERMA DHYESVKEDY PFVELGSRVV DERDDHYRNF RNEERKVVYL DNKCQVLRKD 0401: YLYDGVDSKK NLDFSEPYAV VDRDDKASQS ITRCLNKERE AYLDNERNAV FSDDKRQELR NEYHPGNDGR IHSDVDMADI VVDQDGRGVQ LQRRCLNKGK 0501: AAYLDNERKD VYLNYKIQQL EKDYDSRSDA KIYPDDVNRL DILADWEREN SRGLRYRGGS LNDRREAYLQ CESQQLLNDY ETNSYGIMHP DVNKSDTLED 0601: REDSRGLRYR GGSLNDKKEA YMQCERQRLL NDYETNSYGM MHPHVNKSDT LVDHEDGRGR RYRGVSLNDK KEAYLQCERQ RLLNDHETDS YVMRHPDVNK 0701: SDILVDHEDA RGRRYGGVSL NDKKDAYLQC ENQQLLNDYE TDSYVMMPPD VNRSDILVDH EDARGLRYRG VSLNDRKEAY FQSESQQLLK DHETNSFGMM 0801: HPSLNKSDIL VNGEEARALE RRRGSFDDGE ESYMDYKRGD AYLHYESQQL KKDHDYGIDD RIYRDVNSSD IIVDHGDAKA LELRRVAFID RNEAYLDNES 0901: KDVYQHYNKQ QLKYYDSGID ERMYPAVTKA EIVDRGGARA LERKGMSSND GREAYLPYES QQLLRDHEID SYGVMHPDVS RSSAGKQDEE ALRGRRYLFD 1001: DRDQVYLDDE RLQRRNGGDV KVYANMRYQD GRQEVYHSND SILRTRDDYG LRDNASEVMH ENMPYDYNYR DAKQSRMSYE KADSKRFREH EVAYDYRDKL 1101: GNYAVDGGIS REQFRYSADE RNSGNVDHTS TRRRRLSAKE RLGGRVEEDS RVHVKHRLHQ VRNPNLKGKS HKRYLS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)