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AT3G44350.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAC domain containing protein 61
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC domain containing protein 61 (NAC061); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 90 (TAIR:AT5G22380.1); Has 2643 Blast hits to 2638 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2643; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AL138641EMBL:CP002686EnsemblPlants:AT3G44350EnsemblPlants:AT3G44350.1entrez:823560ExpressionAtlas:Q9M290GeneID:823560
Genevisible:Q9M290GO:GO:0003677GO:GO:0005634GO:GO:0006351GO:GO:0006355hmmpanther:PTHR31989hmmpanther:PTHR31989:SF4
HOGENOM:HOG000237406InParanoid:Q9M290InterPro:IPR003441Pfam:PF02365Pfam:Q9M290Pfscan:PS51005PhylomeDB:Q9M290
PIR:T47425PRIDE:Q9M290PRO:PR:Q9M290PROSITE:PS51005ProteinModelPortal:Q9M290Proteomes:UP000006548RefSeq:NP_190021.1
SMR:Q9M290SUPFAM:SSF101941TAIR:AT3G44350tair10-symbols:anac061tair10-symbols:NAC061UniGene:At.49394UniProt:Q9M290
Coordinates (TAIR10) chr3:-:16022836..16024487
Molecular Weight (calculated) 25305.70 Da
IEP (calculated) 7.51
GRAVY (calculated) -0.54
Length 228 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEELSVGFR FYPTEVELLT YYLRIQLGGG NATIHSLIPI LDVFSVEPTQ LPNLAGERCR GDAEQWIFFV PRQEREARGG RPSRTTGSGY WKATGSPGPV
101: FSPDNRVIGV KKTMVFYTGK APTGRKTKWK MNEYKAVETA SVSTIPKSGS SRAFDRRPTE AYAIERNLPS NGVETSSRAT ISTSPETSHS GGNQVDLPVN
201: ATTITQSISD MVDELSQPFW EWEQMNWS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)