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AT3G44190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.861
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FAD/NAD(P)-binding oxidoreductase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FAD/NAD(P)-binding oxidoreductase family protein; FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G22140.1); Has 14374 Blast hits to 14371 proteins in 2395 species: Archae - 444; Bacteria - 11667; Metazoa - 157; Fungi - 716; Plants - 246; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0446eggNOG:ENOG410IMW0EMBL:AL353814EMBL:AY084651EMBL:BT002026EMBL:BT008451EMBL:CP002686
EnsemblPlants:AT3G44190EnsemblPlants:AT3G44190.1entrez:823541Gene3D:3.50.50.60GeneID:823541GO:GO:0005794GO:GO:0016491
Gramene:AT3G44190.1hmmpanther:PTHR22912hmmpanther:PTHR22912:SF180HOGENOM:HOG000238788InterPro:IPR000103InterPro:IPR023753KEGG:ath:AT3G44190
OMA:AELHANIPfam:PF07992PhylomeDB:Q9LXP4PIR:T49135PRINTS:PR00469Proteomes:UP000006548RefSeq:NP_190005.1
SMR:Q9LXP4STRING:3702.AT3G44190.1SUPFAM:SSF51905TAIR:AT3G44190UniGene:At.36181UniProt:Q9LXP4
Coordinates (TAIR10) chr3:-:15902004..15903402
Molecular Weight (calculated) 40087.50 Da
IEP (calculated) 9.34
GRAVY (calculated) -0.23
Length 367 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKTESVSGK GKRVIVIGGG IAGSLASKFL QFDSDLTLID PKEYFEIIWA SLRSMVEPAF AERSVINHKK YLQNGRVVTS PAVNITDTDV LTADGLVFGY
101: DYLVIATGHN DVLPKTRQEK LSQYQTEHEK IKSSESILIV GGGPSGVELA AEIAVDFPEK KVTIVHNGPR LLEFVGQKAA DKALDWMKSK RVEVILNQRV
201: DLSSASDGSK TYRTSGGETI HADCHFLCTG KPLSSEWLKG TVLKDNLDGK GRLMVDEYLR VKGRKNVFAI GDITDVPEMK QGYIAEKHAS VATKNIKLLM
301: SGGNEKKMST YKPGPDIAII SLGRKDSVAQ FPFMTVSGCI PGLIKSKDLF VGKTRKARGL DPNLVEP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)