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AT3G44110.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27177187 (2016): nucleus
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:20843791 (2010): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15496452 (2005): nucleus
  • PMID:14505352 (2003): nucleus
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : DNAJ homologue 3
Curator
Summary (TAIR10)
homologous to the co-chaperon DNAJ protein from E coli
Computational
Description (TAIR10)
DNAJ homologue 3 (ATJ3); FUNCTIONS IN: unfolded protein binding, heat shock protein binding, ATP binding; INVOLVED IN: protein folding, response to salt stress, regulation of ATPase activity; LOCATED IN: nucleolus, cell wall, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ (InterPro:IPR003095), Chaperone DnaJ (InterPro:IPR012724); BEST Arabidopsis thaliana protein match is: DNAJ homologue 2 (TAIR:AT5G22060.1); Has 26899 Blast hits to 26588 proteins in 3465 species: Archae - 213; Bacteria - 10134; Metazoa - 4292; Fungi - 2434; Plants - 2563; Viruses - 88; Other Eukaryotes - 7175 (source: NCBI BLink).
Protein Annotations
BioGrid:8851eggNOG:COG0484eggNOG:KOG0712EMBL:AF032883EMBL:AL353814EMBL:AY035087EMBL:AY045655
EMBL:AY088078EMBL:AY113878EMBL:CP002686EMBL:U22340EnsemblPlants:AT3G44110EnsemblPlants:AT3G44110.1entrez:823531
ExpressionAtlas:Q94AW8Gene3D:1.10.287.110Gene3D:2.10.230.10GeneID:823531Genevisible:Q94AW8GO:GO:0005524GO:GO:0005618
GO:GO:0005730GO:GO:0005829GO:GO:0005886GO:GO:0006457GO:GO:0009408GO:GO:0009506GO:GO:0009651
GO:GO:0009911GO:GO:0043462GO:GO:0046872GO:GO:0048573HAMAP:MF_01152hmmpanther:PTHR24078hmmpanther:PTHR24078:SF237
HOGENOM:HOG000226718InParanoid:Q94AW8IntAct:Q94AW8InterPro:IPR001305InterPro:IPR001623InterPro:IPR002939InterPro:IPR008971
InterPro:IPR012724InterPro:IPR018253iPTMnet:Q94AW8KEGG:ath:AT3G44110KO:K09503OMA:QPCDECSPaxDb:Q94AW8
Pfam:PF00226Pfam:PF00684Pfam:PF01556Pfam:Q94AW8Pfscan:PS50076Pfscan:PS51188PhylomeDB:Q94AW8
PIR:S71199PIR:T49127PRIDE:Q94AW8PRINTS:PR00625PRO:PR:Q94AW8PROSITE:PS00636PROSITE:PS50076
PROSITE:PS51188ProteinModelPortal:Q94AW8Proteomes:UP000006548RefSeq:NP_189997.1scanprosite:PS00636SMART:SM00271SMR:Q94AW8
STRING:3702.AT3G44110.1SUPFAM:SSF46565SUPFAM:SSF49493SUPFAM:SSF57938TAIR:AT3G44110tair10-symbols:ATJtair10-symbols:ATJ3
UniGene:At.20860UniGene:At.24417UniProt:Q0WW92UniProt:Q94AW8
Coordinates (TAIR10) chr3:-:15869115..15871059
Molecular Weight (calculated) 46446.80 Da
IEP (calculated) 6.00
GRAVY (calculated) -0.78
Length 420 amino acids
Sequence (TAIR10)
(BLAST)
001: MFGRGPSKKS DNTKFYEILG VPKSASPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GGGPFGGNTS RQRRQRRGED VVHPLKVSLE DVYLGTMKKL SLSRNALCSK CNGKGSKSGA SLKCGGCQGS GMKVSIRQLG PGMIQQMQHA CNECKGTGET
201: INDRDRCPQC KGDKVIPEKK VLEVNVEKGM QHSQKITFEG QADEAPDTVT GDIVFVLQQK EHPKFKRKGE DLFVEHTLSL TEALCGFQFV LTHLDGRSLL
301: IKSNPGEVVK PDSYKAISDE GMPIYQRPFM KGKLYIHFTV EFPDSLSPDQ TKALEAVLPK PSTAQLSDME IDECEETTLH DVNIEDEMRR KAQAQREAYD
401: DDDEDDDHPG GAQRVQCAQQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)