AT3G44050.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: phragmoplast orienting kinesin 2 (TAIR:AT3G19050.1); Has 120776 Blast hits to 67955 proteins in 2875 species: Archae - 1602; Bacteria - 19178; Metazoa - 52262; Fungi - 9870; Plants - 7347; Viruses - 361; Other Eukaryotes - 30156 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:15818738..15824792 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 142676.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.33 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.64 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1263 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MPFISETASA IKRRFGFNDR PAPSESLRSV PCTPEANTVS RDNHTHQSLL FSSAVRSMPE LDEDGAICAG SAQISRSQSF EFNEDPAFWK DHNVQVIIRT 0101: RPLSSSEISV QGNNKCVRQD NGQAITWIGN PESRFTFDLV ADENVSQEQM FKVAGVPMVE NVVAGYNSCM FAYGQTGSGK THTMLGDIEG GTRRHSVNCG 0201: MTPRVFEYLF SRIQKEKEVR KEEKLHFTCR CSFLEIYNEQ ILDLLDPSSY NLQLREDHKK GIHVENLKEI EVSSARDVIQ QLMQGAANRK VAATNMNRAS 0301: SRSHSVFTCI IESKWVSQGV THHRFARLNL VDLAGSERQK SSGAEGERLK EATNINKSLS TLGLVIMNLV SVSNGKSVHV PYRDSKLTFL LQDSLGGNSK 0401: TIIIANISPS SSCSLETLST LKFAQRAKLI KNNAIVNEDA SGDVIAMRLQ IQQLKKEVTR LRGMGGVDNQ DMDTISMGCP ASPMSLKWDG FNGSFTPLTT 0501: HKRMSKVKDY EVALVGAFRR EREKDVALQA LTAENEASMK LEKKREDEIR GLKMMLKLRD SAIKSLQGVT SGKIPVEAHL QKEKGDLMKE IEVLRAQVDR 0601: NQEVTKFATE NLRLKEEIRR LKSQGEEGER DILNQQIQAL QAKLLEALDW KLMHESDSSM VKEDGNISNM FCSNQNQESK KLSSIQDENE FLRMQAIQNR 0701: AEMESLQKSL SFSLDEKERL QKLVDNLSNE LEGKIRSSGM VGDDDQMEVK TMVQAIACVS QREAEAHETA IKLSKENDDL RQKIKVLIED NNKLIELYEQ 0801: VAEENSSRAW GKIETDSSSN NADAQNSAEI ALEVEKSAAE EQKKMIGNLE NQLTEMHDEN EKLMSLYENA MKEKDELKRL LSSPDQKKPI EANSDTEMEL 0901: CNISSEKSTE DLNSAKLKLE LAQEKLSISA KTIGVFSSLE ENILDIIKLS KESKETEEKV KEHQSELGSI KTVSDQTNAR KEVAEKKLAA LRCSLSNFAS 1001: SAVYFQQREE RARAHVNSFS GYLNQKNEEL DVIRSHKREI DAAMGKIQQS EAELKSNIVM LKIKVDEENK RHEEEGVLCT IDNILRTGKA TDLLKSQEEK 1101: TKLQSEMKLS REKLASVRKE VDDMTKKSLK LEKEIKTMET EIEKSSKTRT ESEMELENTI QEKQTIQEME EQGMSEIQNM IIEIHQLVFE SDLRKEEAMI 1201: IREELIAEEL RAKDVHTNMI ERVENALKTL ENQNNSVSGK IEEEVENVLS LVHEASRLLE VSH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)