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AT3G43810.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.968
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:18998720 (2009): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : calmodulin 7
Curator
Summary (TAIR10)
EF hand domain protein encodes a calmodulin. Can functionally complement a yeast CaM mutant.
Computational
Description (TAIR10)
calmodulin 7 (CAM7); FUNCTIONS IN: calcium ion binding; INVOLVED IN: detection of calcium ion, calcium-mediated signaling, regulation of photomorphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3); Has 33955 Blast hits to 23167 proteins in 1763 species: Archae - 4; Bacteria - 223; Metazoa - 14467; Fungi - 7347; Plants - 6966; Viruses - 0; Other Eukaryotes - 4948 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5126eggNOG:KOG0027EMBL:AK227078EMBL:AY088477EMBL:BT025511EnsemblPlants:AT3G43810EnsemblPlants:AT3G43810.1
entrez:823492ExpressionAtlas:Q1H5F3Gene3D:1.10.238.10GeneID:823492GO:GO:0005509Gramene:AT3G43810.1hmmpanther:PTHR23050
hmmpanther:PTHR23050:SF166IntAct:Q1H5F3InterPro:IPR002048InterPro:IPR011992InterPro:IPR018247KEGG:ath:AT3G43810KO:K02183
OMA:HRISGKAPfam:P59220Pfam:PF13499Pfscan:PS50222PhylomeDB:Q1H5F3PROSITE:PS00018PROSITE:PS50222
RefSeq:NP_189967.1scanprosite:PS00018SMART:SM00054SMR:Q1H5F3STRING:3702.AT3G43810.1SUPFAM:SSF47473TAIR:AT3G43810
tair10-symbols:CAM7UniGene:At.23208UniProt:P59220UniProt:Q1H5F3
Coordinates (TAIR10) chr3:-:15664619..15666355
Molecular Weight (calculated) 16848.60 Da
IEP (calculated) 3.88
GRAVY (calculated) -0.62
Length 149 amino acids
Sequence (TAIR10)
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)