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AT3G43150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.987
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G11010.1); Has 34 Blast hits to 32 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AL391731EMBL:CP002686EnsemblPlants:AT3G43150EnsemblPlants:AT3G43150.1entrez:823381GeneID:823381Gramene:AT3G43150.1
hmmpanther:PTHR31420hmmpanther:PTHR31420:SF3HOGENOM:HOG000131634InterPro:IPR021704KEGG:ath:AT3G43150ncoils:CoilPfam:PF11690
PhylomeDB:Q9FY45Proteomes:UP000006548RefSeq:NP_189901.1TAIR:AT3G43150UniGene:At.53684UniProt:Q9FY45
Coordinates (TAIR10) chr3:+:15143695..15144345
Molecular Weight (calculated) 22485.50 Da
IEP (calculated) 4.81
GRAVY (calculated) -0.82
Length 194 amino acids
Sequence (TAIR10)
(BLAST)
001: MIAEIYLDNT YKMERERACT VCPLDPGSPL FLSGDGFEPT GVLFPNAFFH FPSKDKKEAY DFMDKVVDKH RRLYDERQRL GLKRQTLEAR IARIERKIRA
101: MESDPFQWEW RNFDCVAKIP HMLRMYLRAR GQVSGPVNAP VQVIPSDSED SDDEEEDSNP WKRVKNEPDV DVKNEASTSN PEPAMQEPVP EPLP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)