AT3G32190.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.538 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G32590.1); Has 4211 Blast hits to 3490 proteins in 479 species: Archae - 79; Bacteria - 478; Metazoa - 1994; Fungi - 436; Plants - 174; Viruses - 22; Other Eukaryotes - 1028 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:13163278..13164557 | ||||||||||||||||||||
| Molecular Weight (calculated) | 40910.60 Da | ||||||||||||||||||||
| IEP (calculated) | 4.54 | ||||||||||||||||||||
| GRAVY (calculated) | -0.69 | ||||||||||||||||||||
| Length | 358 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPSLRTSHRA GWFQQSFLRY KLLLGYKLLH WFKFQVLSDN SHINAHHSSR TNSELNDMIQ YYERLLLDRE QDVMAWKDKS SSLESDLRSS TEVKQKLEDQ 101: LENLSSKLMQ SNGELQDQYQ RYDKIQEELS NARGRLSESE SNAYDLSNQL SKLQAKSASK ARKEVKGHGI EWIQGAIVFI QTEKTRTELE SDIKEYESNL 201: LLLDQTHDED FSEEQERSEL KAVLAEKRSR LAALPSSSFN PQQFEEFFTE SPPLSESGLD WTSPSDPVEP EVPIMSVVTP EPVATPPEIL PSTNTVTVVI 301: EDDDGSESGI PTEQPVTDVT DETETQSWTQ SILSQLRLNS RWLRIRSGCV HLMGVVPL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)