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AT3G32160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.883
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43150.1); Has 28 Blast hits to 28 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EnsemblPlants:AT3G32160EnsemblPlants:AT3G32160.1entrez:822980GeneID:822980Gramene:AT3G32160.1hmmpanther:PTHR31420
hmmpanther:PTHR31420:SF1InterPro:IPR021704KEGG:ath:AT3G32160ncoils:CoilPaxDb:F4JA79Pfam:PF11690PhylomeDB:F4JA79
Proteomes:UP000006548RefSeq:NP_189759.1TAIR:AT3G32160UniGene:At.65203UniProt:F4JA79
Coordinates (TAIR10) chr3:+:13145440..13145953
Molecular Weight (calculated) 17092.20 Da
IEP (calculated) 4.67
GRAVY (calculated) -0.68
Length 148 amino acids
Sequence (TAIR10)
(BLAST)
001: MENEGASTVC PLDPGNPLFL SGDGFEPASV LFPHAVFHFP LKDKKEAYDF MDKVVDKYRR LCDERQRLGL KRQMLEARIS CVERKVRSME SDPFQWDWRN
101: FDCAAKIPHM LRMYLRARGQ VPCPVNAPVE VIPSDSEEDN DEEEDSNP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)