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AT3G32150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G32190.1); Has 67 Blast hits to 67 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 11; Fungi - 7; Plants - 18; Viruses - 1; Other Eukaryotes - 12 (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EnsemblPlants:AT3G32150EnsemblPlants:AT3G32150.1entrez:822979GeneID:822979Gramene:AT3G32150.1hmmpanther:PTHR31420
hmmpanther:PTHR31420:SF15KEGG:ath:AT3G32150ncoils:CoilPaxDb:F4JA78ProteinModelPortal:F4JA78Proteomes:UP000006548RefSeq:NP_189758.1
TAIR:AT3G32150UniGene:At.53632UniProt:F4JA78
Coordinates (TAIR10) chr3:+:13143627..13144825
Molecular Weight (calculated) 26676.30 Da
IEP (calculated) 3.78
GRAVY (calculated) -0.71
Length 241 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSDASRLGK TQSCQPLIGG ALQSVNTFYF TLTTRPRYDK LQGELSTTQD RLSESESAAY GLNDQFSELK AKYNAITEKT RPEMESDIKE YESNLLLLDQ
101: THDEDFSEEQ ERSVFEAVLV EKRSRLAALT SSSFNPQQFE EFFTELPPLS ESGLDWAGPS EPVEPEISVT SVETPEPVVI PPEVPPSTNT ETVVIEDDDA
201: SDLGIPTEQP VADETNETET TAIDSVDPEP TQTESKVDKD P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)