AT3G30230.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myosin heavy chain-related | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
myosin heavy chain-related; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G32590.1); Has 966 Blast hits to 926 proteins in 239 species: Archae - 26; Bacteria - 146; Metazoa - 447; Fungi - 105; Plants - 125; Viruses - 1; Other Eukaryotes - 116 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:11879235..11881788 | ||||||||||||||||||||
| Molecular Weight (calculated) | 59064.10 Da | ||||||||||||||||||||
| IEP (calculated) | 8.53 | ||||||||||||||||||||
| GRAVY (calculated) | -0.66 | ||||||||||||||||||||
| Length | 527 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNPDTERPES PSFDEGGSNN DICTRLNDIA GPHYTSICTL QSLERLKDLY QILPEIMAES EMHGPFESPE DPRPGYLCVY KIYFKGCGLT FPLPKALVCY 101: LDALIIALPQ LTPNLLRTIF GIITIAAEAG FVIGVPELNE LLTMRSSSKK NGSTPCPERR GGCSPRRNLS PHRNSPRYSP RNRLSSKPVA DLIRKKRDRS 201: ARGNSSPRRE KSKARTDRSP RLSLPPRSMG PPLPVVTSPP PRLSGEKTDR GVTPRQEAME TEGNVFRCFK TQKDAILPNF DRWRPTIHKR FLLHAYHSSQ 301: GKFSSLEADL RSLSDSKQKL EDQVDLFSTE LKKSNAELQD QYRRHDKLQD ELSVARGRLS ESKSAAYTLN NQFTKLEAKY KAITKLRDAE LAKSAAKARN 401: EVKGRGMELI QGAILFIQTE QARSELESDI KEHESNLLLL DQIHKDDFSE EQERSDLKAV LYEKRIRLAA LPASSFNPQH FEEFFTQSPP LGESGLNWAG 501: SSEPVDTAAP EVPATSIGIV EPDPALP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)