AT3G29400.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : exocyst subunit exo70 family protein E1 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
exocyst subunit exo70 family protein E1 (EXO70E1); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein E2 (TAIR:AT5G61010.2); Has 880 Blast hits to 870 proteins in 128 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 86; Plants - 636; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:11297339..11299315 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75230.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.64 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||||||||||||||||||||||||||
| Length | 658 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGEFEVDGEE KLIVAAKYLV KELRSGKSLT KNAKNVLGNL LLELSRVVIA EDTQDRDEED EIGEIEERLN VVSEKIMTRE VDESMIWDLG SDEGNLYLDA 101: VNELRSLIDR LDGSEELSLR KAHDVLQIAM ARLEDEFKHL LVENRLPFEL EHSSFRSIEA DHGVEEESMA SFGAASTEDL ILGSNNDSRR NSGDVVVDLV 201: NPDVILDLKN IANTMIASGY DRECIQVCTM VRKDALDEFL YNHEVEKLSI EDVLRMDWAT LNTNIKKWVR VMRDIVQVYL LSEKSLDNQI FGDLNEIGLT 301: CFVDTVKAPM MQLLNFGEAV SLGPRQPEKL LRILEMYELA SELLPEIDAL FLDHPGSSVR TEYREVMRRL GDCARTTFLE FKSAIAADVS SHPFPGGAVH 401: PLTNYVMNYL MALTDFKHTL DSLLMEHDDA EDLTIPPSPD IINPVMVEEE STYENSSSPE KFLAMTRHFY SITSVLEANL QEKSKLYKDV SLQHIFLLNN 501: IHYMTRKVLK SELRHIFGDK WNRKHTWKFQ QQATEYERAT WLPVLSFLKD DGSGSGPGSG SGSGSKNLRP RERFQGFNTA FEEVYKAQTG WLISDEGLRE 601: DVRTKASMWV IQAYWTFYSR HKNSVSERYI KYTTDDIERL LLDLFAGSSK SLNNSYRR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)