AT3G29310.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : calmodulin-binding protein-related | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
calmodulin-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 948 Blast hits to 846 proteins in 195 species: Archae - 0; Bacteria - 37; Metazoa - 375; Fungi - 99; Plants - 124; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:11249712..11251452 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61499.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.92 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.83 | ||||||||||||||||||||||||||||||||||||
| Length | 551 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASHHHHNHN HVCSRHQNHH NNTPQFATSP NCCNKSNHPS PPPAEDNLLH LVATYLQNHQ QETQCSCETS CQNFNVIRSQ NRVLRQHKNV PREYDQVVLS 101: CLLRKIDDLE SSLNKFSSFY DKRRDRHSTL RDSAARVIQT HFRSYLVHRS ISFRQLKELA MIKASFLSLK SSVSGKLIFP FKVVSRKATD LLLQLDSIQG 201: RIDPMIRSSK RSLSRDLVRF VQYVDDCVVK RYGFVVKSGS GIKLNGKKPQ GFGTSSEDED NNADMSDDSE EVPVSSIDKR KVASSKSRTG VVIEGDVVKP 301: PVMKFVVLDK NRNVCQVYGN RHDLTSSAED DSVDGDEETL VMSRDNGRKQ SLKARNGVSV KGGGGKTTRV VKTVSFDENG NVCKVYGDTH DLTSSAEDDD 401: SVDVGEETLV MCRDEGKRRS SKTGSRVLVK GSGGKTNRVV KTVSFDENGN VYKAYGDTPE SSIISEEDDS TSGSNEGNGE EKGNVNEVEE IKYVPKENES 501: FEEEEEKETD SENEVSSSEG SEGDKRVTKK EVQHQKGSLM FSPPLPLKME P |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)