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AT3G29310.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : calmodulin-binding protein-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
calmodulin-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 948 Blast hits to 846 proteins in 195 species: Archae - 0; Bacteria - 37; Metazoa - 375; Fungi - 99; Plants - 124; Viruses - 14; Other Eukaryotes - 299 (source: NCBI BLink).
Protein Annotations
BioGrid:7918eggNOG:ENOG410IYM0eggNOG:ENOG410Z01QEMBL:AP001309EMBL:AP002045EMBL:AY078969EMBL:AY149937
EMBL:CP002686EnsemblPlants:AT3G29310EnsemblPlants:AT3G29310.1entrez:822589GeneID:822589Genevisible:Q9LIB3GO:GO:0005886
GO:GO:0009507Gramene:AT3G29310.1hmmpanther:PTHR33322hmmpanther:PTHR33322:SF7HOGENOM:HOG000153022InParanoid:Q9LIB3IntAct:Q9LIB3
iPTMnet:Q9LIB3KEGG:ath:AT3G29310OMA:EIKYVPKPaxDb:Q9LIB3Pfam:Q9LIB3PhylomeDB:Q9LIB3PRIDE:Q9LIB3
PRO:PR:Q9LIB3ProteinModelPortal:Q9LIB3Proteomes:UP000006548RefSeq:NP_189577.2STRING:3702.AT3G29310.1TAIR:AT3G29310UniGene:At.36935
UniProt:Q9LIB3
Coordinates (TAIR10) chr3:+:11249712..11251452
Molecular Weight (calculated) 61499.50 Da
IEP (calculated) 6.92
GRAVY (calculated) -0.83
Length 551 amino acids
Sequence (TAIR10)
(BLAST)
001: MASHHHHNHN HVCSRHQNHH NNTPQFATSP NCCNKSNHPS PPPAEDNLLH LVATYLQNHQ QETQCSCETS CQNFNVIRSQ NRVLRQHKNV PREYDQVVLS
101: CLLRKIDDLE SSLNKFSSFY DKRRDRHSTL RDSAARVIQT HFRSYLVHRS ISFRQLKELA MIKASFLSLK SSVSGKLIFP FKVVSRKATD LLLQLDSIQG
201: RIDPMIRSSK RSLSRDLVRF VQYVDDCVVK RYGFVVKSGS GIKLNGKKPQ GFGTSSEDED NNADMSDDSE EVPVSSIDKR KVASSKSRTG VVIEGDVVKP
301: PVMKFVVLDK NRNVCQVYGN RHDLTSSAED DSVDGDEETL VMSRDNGRKQ SLKARNGVSV KGGGGKTTRV VKTVSFDENG NVCKVYGDTH DLTSSAEDDD
401: SVDVGEETLV MCRDEGKRRS SKTGSRVLVK GSGGKTNRVV KTVSFDENGN VYKAYGDTPE SSIISEEDDS TSGSNEGNGE EKGNVNEVEE IKYVPKENES
501: FEEEEEKETD SENEVSSSEG SEGDKRVTKK EVQHQKGSLM FSPPLPLKME P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)