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AT3G28560.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.913
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : BCS1 AAA-type ATPase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
BCS1 AAA-type ATPase; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28540.2); Has 552 Blast hits to 525 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 2; Plants - 512; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Protein Annotations
EMBL:AP000420EMBL:AY924779EMBL:CP002686EMBL:DQ132691EnsemblPlants:AT3G28560EnsemblPlants:AT3G28560.1entrez:822486
GeneID:822486GO:GO:0016021Gramene:AT3G28560.1hmmpanther:PTHR23070hmmpanther:PTHR23070:SF44InterPro:IPR025753KEGG:ath:AT3G28560
OMA:SHEWISWPfam:PF14363PhylomeDB:Q9LJJ9Proteomes:UP000006548RefSeq:NP_189497.1TAIR:AT3G28560TMHMM:TMhelix
UniGene:At.53542UniGene:At.73270UniProt:Q9LJJ9
Coordinates (TAIR10) chr3:+:10707603..10708376
Molecular Weight (calculated) 30673.60 Da
IEP (calculated) 11.14
GRAVY (calculated) -1.08
Length 257 amino acids
Sequence (TAIR10)
(BLAST)
001: MLETGSIWGF TGSTMTSLMF FWAMYNQVHI EKYIYKLMGW VSNSVHIKFN EYSGEGLEKS EAFDTIHNYL STKSTALGNR LKANESKKSK SLVLSLDDHE
101: TVEDVFQGVK VKWSSSVREN QNQSSTNRDK GFAERRYLTL SFHSRHREMI TTTYLDHVLR EGKEIGLKKR ERKLYTNNSS HEWISWRLGT NWSNVSFDHP
201: ATLETFAMDP EKNKAEKEAW KKRRRKRGRL LRKKRRTKQR RKLGRRRRKQ RMQRRRN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)