AT3G28560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.913 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : BCS1 AAA-type ATPase | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
BCS1 AAA-type ATPase; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G28540.2); Has 552 Blast hits to 525 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 2; Plants - 512; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:10707603..10708376 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 30673.60 Da | ||||||||||||||||||||||||
| IEP (calculated) | 11.14 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.08 | ||||||||||||||||||||||||
| Length | 257 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLETGSIWGF TGSTMTSLMF FWAMYNQVHI EKYIYKLMGW VSNSVHIKFN EYSGEGLEKS EAFDTIHNYL STKSTALGNR LKANESKKSK SLVLSLDDHE 101: TVEDVFQGVK VKWSSSVREN QNQSSTNRDK GFAERRYLTL SFHSRHREMI TTTYLDHVLR EGKEIGLKKR ERKLYTNNSS HEWISWRLGT NWSNVSFDHP 201: ATLETFAMDP EKNKAEKEAW KKRRRKRGRL LRKKRRTKQR RKLGRRRRKQ RMQRRRN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)