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AT3G28040.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich receptor-like protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G56370.1); Has 223464 Blast hits to 137757 proteins in 4468 species: Archae - 159; Bacteria - 21919; Metazoa - 74524; Fungi - 10664; Plants - 90017; Viruses - 245; Other Eukaryotes - 25936 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G28040-MONOMERBioGrid:7758eggNOG:COG0515eggNOG:COG4886eggNOG:ENOG410IFCREMBL:AB028616EMBL:CP002686
EMBL:FJ708729EnsemblPlants:AT3G28040EnsemblPlants:AT3G28040.1entrez:822428Gene3D:3.80.10.10GeneID:822428Genevisible:Q9LRT1
GO:GO:0004672GO:GO:0005524GO:GO:0016021Gramene:AT3G28040.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF221HOGENOM:HOG000116551
InParanoid:Q9LRT1InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591InterPro:IPR011009InterPro:IPR013210InterPro:IPR017441
InterPro:IPR032675iPTMnet:Q9LRT1KEGG:ath:AT3G28040OMA:PLKGYYWPaxDb:Q9LRT1Pfam:PF00069Pfam:PF00560
Pfam:PF08263Pfam:PF13516Pfam:PF13855Pfam:Q9LRT1Pfscan:PS50011Pfscan:PS51450PhylomeDB:Q9LRT1
PRIDE:Q9LRT1PRO:PR:Q9LRT1PROSITE:PS00107PROSITE:PS50011PROSITE:PS51450ProteinModelPortal:Q9LRT1Proteomes:UP000006548
RefSeq:NP_189443.2scanprosite:PS00107SMART:SM00369SMR:Q9LRT1STRING:3702.AT3G28040.1SUPFAM:SSF52058SUPFAM:SSF56112
TAIR:AT3G28040TMHMM:TMhelixUniGene:At.28161UniProt:Q9LRT1
Coordinates (TAIR10) chr3:+:10435139..10438268
Molecular Weight (calculated) 111939.00 Da
IEP (calculated) 7.04
GRAVY (calculated) -0.13
Length 1016 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGKQRRTMIS FTLFLTLTMM SSLINGDTDS IQLNDDVLGL IVFKSDLNDP FSHLESWTED DNTPCSWSYV KCNPKTSRVI ELSLDGLALT GKINRGIQKL
0101: QRLKVLSLSN NNFTGNINAL SNNNHLQKLD LSHNNLSGQI PSSLGSITSL QHLDLTGNSF SGTLSDDLFN NCSSLRYLSL SHNHLEGQIP STLFRCSVLN
0201: SLNLSRNRFS GNPSFVSGIW RLERLRALDL SSNSLSGSIP LGILSLHNLK ELQLQRNQFS GALPSDIGLC PHLNRVDLSS NHFSGELPRT LQKLKSLNHF
0301: DVSNNLLSGD FPPWIGDMTG LVHLDFSSNE LTGKLPSSIS NLRSLKDLNL SENKLSGEVP ESLESCKELM IVQLKGNDFS GNIPDGFFDL GLQEMDFSGN
0401: GLTGSIPRGS SRLFESLIRL DLSHNSLTGS IPGEVGLFIH MRYLNLSWNH FNTRVPPEIE FLQNLTVLDL RNSALIGSVP ADICESQSLQ ILQLDGNSLT
0501: GSIPEGIGNC SSLKLLSLSH NNLTGPIPKS LSNLQELKIL KLEANKLSGE IPKELGDLQN LLLVNVSFNR LIGRLPLGDV FQSLDQSAIQ GNLGICSPLL
0601: RGPCTLNVPK PLVINPNSYG NGNNMPGNRA SGGSGTFHRR MFLSVSVIVA ISAAILIFSG VIIITLLNAS VRRRLAFVDN ALESIFSGSS KSGRSLMMGK
0701: LVLLNSRTSR SSSSSQEFER NPESLLNKAS RIGEGVFGTV YKAPLGEQGR NLAVKKLVPS PILQNLEDFD REVRILAKAK HPNLVSIKGY FWTPDLHLLV
0801: SEYIPNGNLQ SKLHEREPST PPLSWDVRYK IILGTAKGLA YLHHTFRPTT IHFNLKPTNI LLDEKNNPKI SDFGLSRLLT TQDGNTMNNN RFQNALGYVA
0901: PELECQNLRV NEKCDVYGFG VLILELVTGR RPVEYGEDSF VILSDHVRVM LEQGNVLECI DPVMEEQYSE DEVLPVLKLA LVCTSQIPSN RPTMAEIVQI
1001: LQVINSPVPH RIMDSF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)