AT3G27610.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.990 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nucleotidylyl transferase superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nucleotidylyl transferase superfamily protein; BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT2G01220.2); Has 420 Blast hits to 413 proteins in 52 species: Archae - 6; Bacteria - 25; Metazoa - 0; Fungi - 3; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:10225729..10228152 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42610.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.01 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||
| Length | 389 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAESAIRTIV ESIHSSPTQA VVYLSGGASQ SLGWLMSVPG ASNTLLEAVV PYSMISMVQL LGRVPNQHCS QSMANEMALL AYNRALKLSK PGCAVLGVGF 101: TGTLATSRPK RGDHRFFLSI RASNRIWETS VTLTKGKRSR EEEDKVASSV LIQAMAKACQ VSETLDSGLT DSEVLNESVI QFSEEEELEQ LIDGQICSKI 201: YPFSKESYGS DKDRKIILPG SFNPLHDGDL KLLEAAMSVS EEGGYPCFEI SALNADKPSL TVTEIKDRVK QFEVLEKTVI VSNQPFFYKK AELFPGSSFV 301: IGADTAARIV NPKYYEGSHK RMLEVLGDCK RTGCKFLVGG RNVDSVFKVL DDHEIPKEIS TMFTSISADT FRMDISSTEL RKNQGGVIS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)