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AT3G27590.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.661
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05095.1); Has 18 Blast hits to 18 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410Y65VeggNOG:KOG1075EMBL:CP002686EnsemblPlants:AT3G27590
EnsemblPlants:AT3G27590.1entrez:822381GeneID:822381Gramene:AT3G27590.1
KEGG:ath:AT3G27590PaxDb:F4IWK7PRIDE:F4IWK7Proteomes:UP000006548
RefSeq:NP_189396.2STRING:3702.AT3G27590.1TAIR:AT3G27590UniGene:At.53520
UniProt:F4IWK7
Coordinates (TAIR10) chr3:+:10220415..10221715
Molecular Weight (calculated) 13331.30 Da
IEP (calculated) 11.89
GRAVY (calculated) -0.18
Length 118 amino acids
Sequence (TAIR10)
(BLAST)
001: MWFHFTVLKI VKDFKEVGGS YDRGASMPHM DARGLPATAR GRRLSSSSGV FYYFALLISS SRVQERNQRI HSSSQKTSLT IVKEIKVILK ARLDPLARAQ
101: RLARPGSSVL STWFRLFG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)