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AT3G26860.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant self-incompatibility protein S1 family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant self-incompatibility protein S1 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: Plant self-incompatibility protein S1 family (TAIR:AT3G27331.1); Has 39 Blast hits to 39 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EMBL:DQ446705EnsemblPlants:AT3G26860EnsemblPlants:AT3G26860.1entrez:822302ExpressionAtlas:Q1PEL2GeneID:822302
Gramene:AT3G26860.1HOGENOM:HOG000064548PhylomeDB:Q1PEL2Proteomes:UP000006548RefSeq:NP_189321.2TAIR:AT3G26860TMHMM:TMhelix
UniGene:At.64137UniProt:Q1PEL2
Coordinates (TAIR10) chr3:-:9901516..9901884
Molecular Weight (calculated) 10764.20 Da
IEP (calculated) 9.23
GRAVY (calculated) 0.02
Length 95 amino acids
Sequence (TAIR10)
(BLAST)
1: MQNLSILLVC SFCILGHVSS AGIRIGNELK NKKLLWMRCY SKDDVIGPLI IPIGGHRFNY FAFKLYSASD DGGVWDWRAR EDGIYLKIKA ERGVN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)