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AT3G26850.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : histone-lysine N-methyltransferases
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
histone-lysine N-methyltransferases; FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chromosome; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: SRI, Set2 Rpb1 interacting (InterPro:IPR013257); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G18640.1); Has 135 Blast hits to 135 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 88; Viruses - 5; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKD3eggNOG:ENOG4112A11EMBL:AB016889EMBL:AY056130EMBL:BT015404EMBL:CP002686EnsemblPlants:AT3G26850
EnsemblPlants:AT3G26850.1EnsemblPlants:AT3G26850.2entrez:822300GeneID:822300GO:GO:0008168Gramene:AT3G26850.1Gramene:AT3G26850.2
hmmpanther:PTHR36886hmmpanther:PTHR36886:SF2HOGENOM:HOG000153148KEGG:ath:AT3G26850OMA:ECNSHETPhylomeDB:Q9LW25Proteomes:UP000006548
RefSeq:NP_566802.1RefSeq:NP_974368.1TAIR:AT3G26850UniGene:At.6034UniGene:At.66477UniProt:Q9LW25
Coordinates (TAIR10) chr3:-:9896541..9897415
Molecular Weight (calculated) 29576.60 Da
IEP (calculated) 5.17
GRAVY (calculated) -0.86
Length 265 amino acids
Sequence (TAIR10)
(BLAST)
001: MTFQTEVPDD GSRQASSSPY SGKGKIVPEC GLVGDMYDPF VDSFEPASVK LDCVQEHEPD NDLCIVPKAS ISSNRPLSME ENNQAVDKEP LCESEMTARV
101: SVSSNKPADV EENTAGIEIG EVVSGEDDEF GKNVDDGREC NSHETLTPNS DNENPKVENN VHEGDNTRKK SREKSKERDS SRSMKLFKVV LTKFVKDLLK
201: PSWRQGNMSK EAFKTIVKRV VDKVSNSMEG RRIPKSRAKI DKYIDSSQQK LTKLVMGYVD KYVKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)