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AT3G26670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.986
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF803)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT3G23870.1); Has 1048 Blast hits to 1038 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 347; Fungi - 379; Plants - 231; Viruses - 2; Other Eukaryotes - 89 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNR8eggNOG:KOG2922EMBL:AB026648EMBL:AK226900
EMBL:AY093129EMBL:BT006587EMBL:CP002686EnsemblPlants:AT3G26670
EnsemblPlants:AT3G26670.1EnsemblPlants:AT3G26670.2EnsemblPlants:AT3G26670.3entrez:822279
GeneID:822279Genevisible:Q8RWF4GO:GO:0005769GO:GO:0005886
GO:GO:0015095GO:GO:0015693GO:GO:0016021Gramene:AT3G26670.1
Gramene:AT3G26670.2Gramene:AT3G26670.3hmmpanther:PTHR12570hmmpanther:PTHR12570:SF9
HOGENOM:HOG000005877InParanoid:Q8RWF4InterPro:IPR008521KEGG:ath:AT3G26670
OMA:MSSRYEFPANTHER:PTHR12570PaxDb:Q8RWF4Pfam:PF05653
Pfam:Q8RWF4PhylomeDB:Q8RWF4PRIDE:Q8RWF4PRO:PR:Q8RWF4
ProteinModelPortal:Q8RWF4Proteomes:UP000006548RefSeq:NP_189301.1RefSeq:NP_850634.1
RefSeq:NP_974367.1SUPFAM:0043518TAIR:AT3G26670TMHMM:TMhelix
UniGene:At.21140UniGene:At.37175UniProt:Q8RWF4
Coordinates (TAIR10) chr3:-:9798236..9800562
Molecular Weight (calculated) 48411.50 Da
IEP (calculated) 8.05
GRAVY (calculated) 0.46
Length 441 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEWVIGAFI NIFGSVAINF GTNLLKLGHN ERERLALQDG GGKMPLKPII HNQTWRVGIL VFLLGNCLNF ISFGYAAQSL LAALGSIQFV SNIAFAYVVL
101: NKMVTVKVLV ATAFIVLGNV FLVAFGNHQS PVFTPEQLAE KYSNVTFLVY CGILILIVAV HHFLYRKGEV LISTPGQEIS SYWKMLLPFS YAVVSGAIGS
201: CSVLFAKSLS NLLRLAMSSS YQLHSWFTYS MLLLFLSTAG FWMTRLNEGL SLYDAILIVP MFQIAWTFFS ICTGCIYFQE FQVFDALRTT MFILGMMCVF
301: IGISLLAPDD TRGNETKDNS SSLDSIVSSS VPTEEDRLIP QSSEDGHSKD TRVVVQGMYM KAADLIAKTK TACLAALGFG EDSINASAIL VMPMVSSKIT
401: GFRGNGLERA KILSMRGSGW SKLAMEEEGT RMLEKTISSK A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)