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AT3G26600.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.979
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : armadillo repeat only 4
Curator
Summary (TAIR10)
Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.
Computational
Description (TAIR10)
armadillo repeat only 4 (ARO4); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 2 (TAIR:AT5G66200.1); Has 868 Blast hits to 710 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 191; Plants - 457; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGGPeggNOG:ENOG410YAVIEMBL:AB028611EMBL:BT046121EMBL:CP002686EMBL:X97616EMBL:X98130
EnsemblPlants:AT3G26600EnsemblPlants:AT3G26600.1entrez:822269Gene3D:1.25.10.10GeneID:822269GO:GO:0009506Gramene:AT3G26600.1
hmmpanther:PTHR23315hmmpanther:PTHR23315:SF102HOGENOM:HOG000239900InterPro:IPR000225InterPro:IPR011989InterPro:IPR016024KEGG:ath:AT3G26600
OMA:SVGDMKWPfam:PF00514Pfscan:PS50176PhylomeDB:Q38957PROSITE:PS50176Proteomes:UP000006548RefSeq:NP_189292.1
SMART:SM00185SMR:Q38957STRING:3702.AT3G26600.1SUPFAM:SSF48371TAIR:AT3G26600tair10-symbols:ARO4UniGene:At.5
UniGene:At.71718UniProt:Q38957
Coordinates (TAIR10) chr3:+:9769889..9771736
Molecular Weight (calculated) 67810.40 Da
IEP (calculated) 7.91
GRAVY (calculated) -0.05
Length 615 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEEESRIGD ELSILVLTAE RLRVAVDEAE SFKTECGEVG KQVDRLAQML RTLVRFVSSS SQQVYDRPIR RVIVDVKKNL ERGFALVRKC RRHNIIRRVC
101: TIINAADFRK VINLLESSNG DVKWILSVFD SDGDGSFGGG IVISLPPIAT NDPILPWVWS LVASIQMGKL VDKIDAANQL GSLAGDNDRN KKIIVDEGGV
201: SPLLRLLKES SSAEGQIAAA TALGLLACDE DKVRSIVNEL GVPIIVQVLG DSSVRVQIKV ATLVARMAEH DPVAQDEFAR QSVIKPLVTL LSLDVFVDDI
301: HLSKHNSIHS LVQMNKEVEK DPSSKLYRPL KSSKSNVYRD IGGSGSRTGN FKKERDNENP EVKHELKVNC AEALWMLARG NVANSRRITE TKGLLSLAKI
401: VEKEVGELQY NCLMTLMEIT AAAESSADLR RAAFKTNSPA AKAVIDQMLW IIKDVDSPIL KIPAIQSIGS LARTFPARET RMIKPLVEKL GSSNQEVAIT
501: AVISLQKFVC PENFLCAEHS KNIIEYGAIP LLMKLIRNVE QQMQLQCLAL LCYLSVNASN HQQLEQAKVL TVLEGAERLA GLQNMELREL VSKAIYQLSL
601: YNAGSHSQML SYVGP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)