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AT3G26510.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Octicosapeptide/Phox/Bem1p family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (TAIR:AT1G70640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EMBL:AK221748EMBL:AK316923EMBL:AK317054EMBL:AK317170EMBL:BT014785EMBL:BT015013EMBL:CP002686
EnsemblPlants:AT3G26510EnsemblPlants:AT3G26510.1EnsemblPlants:AT3G26510.2EnsemblPlants:AT3G26510.3EnsemblPlants:AT3G26510.4entrez:822258ExpressionAtlas:Q6ID88
GeneID:822258Gramene:AT3G26510.1Gramene:AT3G26510.2Gramene:AT3G26510.3Gramene:AT3G26510.4hmmpanther:PTHR31066InterPro:IPR000270
Pfam:PF00564Proteomes:UP000006548RefSeq:NP_189282.1RefSeq:NP_850632.2RefSeq:NP_974365.2RefSeq:NP_974366.1SMART:SM00666
STRING:3702.AT3G26510.5SUPFAM:SSF54277TAIR:AT3G26510UniGene:At.43367UniProt:Q6ID88
Coordinates (TAIR10) chr3:-:9711886..9712588
Molecular Weight (calculated) 21015.00 Da
IEP (calculated) 9.63
GRAVY (calculated) -0.32
Length 196 amino acids
Sequence (TAIR10)
(BLAST)
001: MVTSPTNSTI KFLCSYGGKI LPRYPDGKLR YNGGHTRVLA VPRSVSFSEL ASKMAEMCGG VGGSITVTIR CQLPTEDLDA LVSITSDEDL VNLIEEYDLV
101: SSSSPMKIRV FLNPPKSAAG SKKSPPPLAL PSSTTTSSSS TTSSTSSSPR SPSLSKPPLP PSPPRITTVT KNPCYGCYVH RNSRNIYLVH NGNHWQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)