suba logo
AT3G26290.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plasma membrane 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 26
Curator
Summary (TAIR10)
putative cytochrome P450
Computational
Description (TAIR10)
cytochrome P450, family 71, subfamily B, polypeptide 26 (CYP71B26); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 34 (TAIR:AT3G26300.1); Has 33376 Blast hits to 33121 proteins in 1698 species: Archae - 51; Bacteria - 3546; Metazoa - 11995; Fungi - 7038; Plants - 9514; Viruses - 3; Other Eukaryotes - 1229 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G26290-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156EMBL:AB024038EMBL:AY128393EMBL:BT008871
EMBL:CP002686EnsemblPlants:AT3G26290EnsemblPlants:AT3G26290.1entrez:822232Gene3D:1.10.630.10GeneID:822232Genevisible:Q9LTL0
GO:GO:0005506GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0044550Gramene:AT3G26290.1
hmmpanther:PTHR24298hmmpanther:PTHR24298:SF85HOGENOM:HOG000218629InParanoid:Q9LTL0InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
iPTMnet:Q9LTL0KEGG:ath:AT3G26290KO:K00517OMA:NEYWKELPaxDb:Q9LTL0Pfam:PF00067Pfam:Q9LTL0
PhylomeDB:Q9LTL0PRIDE:Q9LTL0PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9LTL0PROSITE:PS00086ProteinModelPortal:Q9LTL0
Proteomes:UP000006548RefSeq:NP_189260.1scanprosite:PS00086SMR:Q9LTL0STRING:3702.AT3G26290.1SUPFAM:SSF48264TAIR:AT3G26290
tair10-symbols:CYP71B26TMHMM:TMhelixUniGene:At.5699UniProt:Q9LTL0
Coordinates (TAIR10) chr3:-:9632770..9634439
Molecular Weight (calculated) 57083.40 Da
IEP (calculated) 7.94
GRAVY (calculated) -0.22
Length 500 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSIWILSLL FFIIFLLLAA FKRKNHGKHR RIPSPPGFPI IGNLHQLGEL QHQSLWKLSK KYGPVMLLKL GKVPTLILSS SETAKQALRD YDLHCCSRPS
101: LAGGRELSYN NLDMSSSPYN EYWKELRKLC SQELFSANKI QSIQPIKDEE VKKVIDSIAE SSSLKNPVNL SKTFLALTTS VVCKAAFGVS FEGSVLNSDR
201: FNKLVRDTFE MLGSFSASDF IPYVGWIIDK FNGLQGWRKK SFRDLDAFYE QIFDLHKEEK EVGSEDLVDV LLRLEKEEIV VGNGKLTRNH IKAILMNILL
301: GGIDTSAITM TWAMAELAKN PRVMKKVQAE IRNQIKNKER ISFDDTDKLE YLKMVIKETW RLHPPTPLLL PRDVITEFEI NGYTIPAKTR LHVNVWAIGR
401: DPDTWKDPEM FLPERFNDSN IDAKGQNFEL LSFGSGRRIC PGLYMGTTMV EFGLANMLYH FDWKLPEGMV VEDIDMEEAP GLTVSKKSEL VLVPVKYLDH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)