suba logo
AT3G26230.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
endoplasmic reticulum 0.981
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 71, subfamily B, polypeptide 24
Curator
Summary (TAIR10)
putative cytochrome P450
Computational
Description (TAIR10)
cytochrome P450, family 71, subfamily B, polypeptide 24 (CYP71B24); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily B, polypeptide 3 (TAIR:AT3G26220.1); Has 33577 Blast hits to 33331 proteins in 1707 species: Archae - 48; Bacteria - 3554; Metazoa - 11980; Fungi - 7136; Plants - 9645; Viruses - 6; Other Eukaryotes - 1208 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G26230-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156EMBL:AB024038EMBL:AK226798EMBL:CP002686
EnsemblPlants:AT3G26230EnsemblPlants:AT3G26230.1entrez:822224Gene3D:1.10.630.10GeneID:822224Genevisible:Q9LTL8GO:GO:0005506
GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0020037GO:GO:0044550GO:GO:0098542Gramene:AT3G26230.1
hmmpanther:PTHR24298hmmpanther:PTHR24298:SF144HOGENOM:HOG000218629InParanoid:Q9LTL8InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT3G26230KO:K00517PaxDb:Q9LTL8Pfam:PF00067Pfam:Q9LTL8PhylomeDB:Q9LTL8PRIDE:Q9LTL8
PRINTS:PR00385PRINTS:PR00463PRO:PR:Q9LTL8PROSITE:PS00086ProteinModelPortal:Q9LTL8Proteomes:UP000006548RefSeq:NP_189254.1
scanprosite:PS00086SMR:Q9LTL8STRING:3702.AT3G26230.1SUPFAM:SSF48264TAIR:AT3G26230tair10-symbols:CYP71B24UniGene:At.37248
UniProt:Q9LTL8
Coordinates (TAIR10) chr3:-:9598200..9599892
Molecular Weight (calculated) 56812.60 Da
IEP (calculated) 7.07
GRAVY (calculated) -0.12
Length 498 amino acids
Sequence (TAIR10)
(BLAST)
001: MSILLYFIAL LSLIIIKKIK DSNRNLPPSP LKLPVIGNLY QLRGLFHKCL HDLSKKHGPV LLLRLGFLDM VVISSTEAAE EALKVHDLEC CTRPITNVTS
101: KLWRDGQDIG LAPYGESLRE LRKLSFLKFF STTKVRSFRY IREEENDLMV KKLKEAALKK SSVDLSQTLF GLVGSIIFRS AFGQRFDEGN HVNAEKIEDL
201: MFEVQKLGAL SNSDLFPGGL GWFVDFVSGH NKKLHKVFVE VDTLLNHIID DHLKNSIEEI THDRPDIIDS LLDMIRKQEQ GDSFKLTIDN LKGIIQDIYL
301: AGVDTSAITM IWAMAELVKN PRVMKKVQDE IRTCIGIKQN EKIEEDDVDK LQYLKLVVKE TLRLHPAAPL LLPRETMSQI KIQGYNIPSK TILLVNVWSI
401: GRDPKHWKNP EEFNPERFID CPIDYKGNSF EMLPFGSGRR ICPGIAFAIA TVELGLLNLL YHFDWRLPEE DKDLDMEEAG DVTIIKKVPL KLVPVLHH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)