AT3G26060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Thioredoxin superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ATPRX Q; FUNCTIONS IN: peroxiredoxin activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: chloroplast stromal thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (InterPro:IPR000866), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: 2-cysteine peroxiredoxin B (TAIR:AT5G06290.1); Has 17532 Blast hits to 17530 proteins in 2740 species: Archae - 641; Bacteria - 11774; Metazoa - 878; Fungi - 389; Plants - 371; Viruses - 0; Other Eukaryotes - 3479 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:9524807..9526123 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 23679.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.06 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 216 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAASSSSFTL CNHTTLRTLP LRKTLVTKTQ FSVPTKSSES NFFGSTLTHS SYISPVSSSS LKGLIFAKVN KGQAAPDFTL KDQNGKPVSL KKYKGKPVVL 101: YFYPADETPG CTKQACAFRD SYEKFKKAGA EVIGISGDDS ASHKAFASKY KLPYTLLSDE GNKVRKDWGV PGDLFGALPG RQTYVLDKNG VVQLIYNNQF 201: QPEKHIDETL KFLKAA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)