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AT3G26020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein phosphatase 2A regulatory B subunit family protein
Curator
Summary (TAIR10)
Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol.
Computational
Description (TAIR10)
Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: cytosol, nucleus, protein phosphatase type 2A complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT1G13460.2); Has 1378 Blast hits to 1295 proteins in 202 species: Archae - 0; Bacteria - 8; Metazoa - 590; Fungi - 185; Plants - 302; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink).
Protein Annotations
BioGrid:7530EMBL:AB023041EMBL:AF367267EMBL:AY059158EMBL:CP002686EnsemblPlants:AT3G26020EnsemblPlants:AT3G26020.1
EnsemblPlants:AT3G26020.2entrez:822199ExpressionAtlas:Q9LU89GeneID:822199Genevisible:Q9LU89GO:GO:0000159GO:GO:0007165
GO:GO:0008601hmmpanther:PTHR10257hmmpanther:PTHR10257:SF26HOGENOM:HOG000067326IntAct:Q9LU89InterPro:IPR002554InterPro:IPR016024
KEGG:ath:AT3G26020KO:K11584PANTHER:PTHR10257Pfam:PF01603Pfam:Q9LU89PhylomeDB:Q9LU89PIRSF:PIRSF028043
PRIDE:Q9LU89PRO:PR:Q9LU89ProteinModelPortal:Q9LU89Proteomes:UP000006548Reactome:R-ATH-198753Reactome:R-ATH-202670RefSeq:NP_001030770.1
RefSeq:NP_189231.1SMR:Q9LU89SUPFAM:SSF48371TAIR:AT3G26020UniGene:At.6324UniGene:At.69156UniProt:B9DH07
UniProt:Q9LU89
Coordinates (TAIR10) chr3:+:9514363..9516585
Molecular Weight (calculated) 58761.50 Da
IEP (calculated) 9.13
GRAVY (calculated) -0.49
Length 510 amino acids
Sequence (TAIR10)
(BLAST)
001: MWKQILSKLP NKKSSKHEHR GREHGGHSSS SSHTSGASTS KSTDNGAAKS HAKNASPAGK SAASDSGFKD GNLKSSGNNN NNNNNGVFTP YEALPSFKDV
101: PNTEKQNLFI KKLNLCRVVF DFTDPTKNIK EKDIKRQTLL ELVDYVNSPN GKFSEVGIQE VVRMVSANIF RTLNPQPREN KVIDALDLEE EEPSMDLAWP
201: HLQLVYELFL RFVASPETDT KLAKRYIDQS FVLRLLDLFD SEDPRERDCL KTILHRIYGK FMVHRPFIRK SINNIFYRFV FETEKHNGIA EFLEILGSII
301: NGFALPLKDE HKVFLVRVLI PLHKPKCLQM YHQQLSYCIT QFVEKDCKLA DTVIRGLLKY WPVTNSSKEV MFLNELEEVL EATQPPEFQR CMVPLFRQIA
401: RCLNSLHFQV AERALFLWNN NHIENLIMQN RKVILPIIFP ALERNAQKHW NQAVHSLTLN VRKIFHDLDP ELFKECLAKF KEDESKAAET EAKREATWKR
501: LEELGVRKAS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)