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AT3G25560.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NSP-interacting kinase 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NSP-interacting kinase 2 (NIK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 1 (TAIR:AT5G16000.1); Has 173817 Blast hits to 117543 proteins in 4488 species: Archae - 109; Bacteria - 15009; Metazoa - 43670; Fungi - 8369; Plants - 87261; Viruses - 427; Other Eukaryotes - 18972 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G25560-MONOMERBioCyc:ARA:GQT-799-MONOMERBioGrid:7474EC:2.7.11.1
eggNOG:ENOG410IG2TeggNOG:ENOG410ZS46EMBL:AB025639EMBL:AY075617
EMBL:BT002619EMBL:CP002686EMBL:FJ708728EnsemblPlants:AT3G25560
EnsemblPlants:AT3G25560.1entrez:822143ExpressionAtlas:Q8RY65Gene3D:2.60.120.200
Gene3D:3.80.10.10GeneID:822143Genevisible:Q8RY65GO:GO:0004674
GO:GO:0005524GO:GO:0005886GO:GO:0006952GO:GO:0016021
GO:GO:0016032hmmpanther:PTHR27001hmmpanther:PTHR27001:SF226HOGENOM:HOG000116554
InParanoid:Q8RY65InterPro:IPR000719InterPro:IPR001611InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441
InterPro:IPR032675iPTMnet:Q8RY65PaxDb:Q8RY65Pfam:PF00069
Pfam:PF08263Pfam:PF13855Pfam:Q8RY65Pfscan:PS50011
PhylomeDB:Q8RY65PRIDE:Q8RY65PRO:PR:Q8RY65PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q8RY65Proteomes:UP000006548
RefSeq:NP_189183.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q8RY65STRING:3702.AT3G25560.3SUPFAM:SSF52058SUPFAM:SSF56112
TAIR:AT3G25560tair10-symbols:NIK2TMHMM:TMhelixUniGene:At.37369
UniProt:Q8RY65
Coordinates (TAIR10) chr3:-:9279682..9282560
Molecular Weight (calculated) 70609.80 Da
IEP (calculated) 8.28
GRAVY (calculated) -0.20
Length 635 amino acids
Sequence (TAIR10)
(BLAST)
001: MLQGRREAKK SYALFSSTFF FFFICFLSSS SAELTDKGVN FEVVALIGIK SSLTDPHGVL MNWDDTAVDP CSWNMITCSD GFVIRLEAPS QNLSGTLSSS
101: IGNLTNLQTV LLQNNYITGN IPHEIGKLMK LKTLDLSTNN FTGQIPFTLS YSKNLQYLRV NNNSLTGTIP SSLANMTQLT FLDLSYNNLS GPVPRSLAKT
201: FNVMGNSQIC PTGTEKDCNG TQPKPMSITL NSSQNKSSDG GTKNRKIAVV FGVSLTCVCL LIIGFGFLLW WRRRHNKQVL FFDINEQNKE EMCLGNLRRF
301: NFKELQSATS NFSSKNLVGK GGFGNVYKGC LHDGSIIAVK RLKDINNGGG EVQFQTELEM ISLAVHRNLL RLYGFCTTSS ERLLVYPYMS NGSVASRLKA
401: KPVLDWGTRK RIALGAGRGL LYLHEQCDPK IIHRDVKAAN ILLDDYFEAV VGDFGLAKLL DHEESHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELITGLRA LEFGKAANQR GAILDWVKKL QQEKKLEQIV DKDLKSNYDR IEVEEMVQVA LLCTQYLPIH RPKMSEVVRM LEGDGLVEKW EASSQRAETN
601: RSYSKPNEFS SSERYSDLTD DSSVLVQAME LSGPR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)