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AT3G25470.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : bacterial hemolysin-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
bacterial hemolysin-related; FUNCTIONS IN: methyltransferase activity, RNA binding, nucleic acid binding; INVOLVED IN: methylation, hemolysis by symbiont of host erythrocytes; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942), Ribosomal RNA methyltransferase RrmJ/FtsJ (InterPro:IPR002877), Haemolysin A (InterPro:IPR004538); Has 3788 Blast hits to 3763 proteins in 1590 species: Archae - 10; Bacteria - 3068; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 663 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1189eggNOG:ENOG410IFV7EMBL:AB025639EMBL:AY087760EMBL:CP002686EnsemblPlants:AT3G25470EnsemblPlants:AT3G25470.1
entrez:822131Gene3D:3.10.290.10Gene3D:3.40.50.150GeneID:822131GO:GO:0003723GO:GO:0008168Gramene:AT3G25470.1
hmmpanther:PTHR32319hmmpanther:PTHR32319:SF0HOGENOM:HOG000009215InterPro:IPR002877InterPro:IPR002942InterPro:IPR004538InterPro:IPR029063
KEGG:ath:AT3G25470KO:K06442OMA:VHQMTIEPfam:PF01479Pfam:PF01728Pfscan:PS50889PhylomeDB:Q9LSV5
PIRSF:PIRSF005578PROSITE:PS50889Proteomes:UP000006548RefSeq:NP_566765.1SMART:SM00363SMR:Q9LSV5STRING:3702.AT3G25470.1
SUPFAM:SSF53335SUPFAM:SSF55174TAIR:AT3G25470TIGRfam:TIGR00478TIGRFAMs:TIGR00478UniGene:At.37383UniGene:At.63571
UniProt:Q9LSV5
Coordinates (TAIR10) chr3:+:9233039..9235022
Molecular Weight (calculated) 33206.60 Da
IEP (calculated) 9.55
GRAVY (calculated) -0.09
Length 301 amino acids
Sequence (TAIR10)
(BLAST)
001: MGFHVLRPPI ALRSSLLGFL SKSHNPLLPG RWVQAGECST MRCFASATRG KNKKQRLDEA CVERFNEYSR TLIQSWIMQG KVLVDGRRVI KAGMPVSTTA
101: AIKITAEVPK FVCRGGLKLE AALEKLDVDV SEKVVLDAGL STGGFTDCLL RYGAAHVYGV DVGYGQVADK IRNDKKVTVI ERTNLRYLPG LPQKVDVVTL
201: DLSFISILKV MPAIMNVMKE DATLVTLVKP QFEARRQQVG KGGIVRDPEV HQEVLEKIIN GVERYGFTNK GFIESPIKGA DGNIEFLACF NRGTVKPEAE
301: E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)