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AT3G25420.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : serine carboxypeptidase-like 21
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
serine carboxypeptidase-like 21 (scpl21); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: stem, embryo, leaf, pollen tube; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 20 (TAIR:AT4G12910.1); Has 3999 Blast hits to 3555 proteins in 325 species: Archae - 0; Bacteria - 119; Metazoa - 730; Fungi - 984; Plants - 1665; Viruses - 0; Other Eukaryotes - 501 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G25420-MONOMEREC:3.4.16.-eggNOG:COG2939eggNOG:KOG1282EMBL:AB025639EMBL:CP002686EnsemblPlants:AT3G25420
EnsemblPlants:AT3G25420.1entrez:822126ESTHER:arath-SCP21Gene3D:3.40.50.1820GeneID:822126Genevisible:Q9LSV8GO:GO:0004185
GO:GO:0005576Gramene:AT3G25420.1hmmpanther:PTHR11802hmmpanther:PTHR11802:SF96InParanoid:Q9LSV8InterPro:IPR001563InterPro:IPR018202
InterPro:IPR029058InterPro:IPR033124KEGG:ath:AT3G25420KO:K16296MEROPS:S10.A10PANTHER:PTHR11802PaxDb:Q9LSV8
Pfam:PF00450Pfam:Q9LSV8PhylomeDB:Q9LSV8PRIDE:Q9LSV8PRINTS:PR00724PRO:PR:Q9LSV8PROSITE:PS00131
PROSITE:PS00560ProteinModelPortal:Q9LSV8Proteomes:UP000006548RefSeq:NP_189169.1scanprosite:PS00131scanprosite:PS00560SMR:Q9LSV8
STRING:3702.AT3G25420.1SUPFAM:SSF53474TAIR:AT3G25420tair10-symbols:scpl21UniGene:At.53489UniProt:Q9LSV8
Coordinates (TAIR10) chr3:+:9217832..9220836
Molecular Weight (calculated) 56108.90 Da
IEP (calculated) 7.02
GRAVY (calculated) -0.11
Length 505 amino acids
Sequence (TAIR10)
(BLAST)
001: MGRLVEAIIA SILLSLCFTI TKSAPKSALI TNLPGFNGTF PSKHYAGYVA IDKHRNKNLW YYFVESERNA SVDPVVLWLN GGPGCSSMDG FVYEHGPFNF
101: EPKKKNSHLL HLNPYSWSKV SNIIYLDSPV GVGFSYSNDN ADYTTDDTKT ASDTHTFLLE WFKMFPEFQS NPFFISGESY AGIYVPTLAA EVVKGHKNVT
201: KPVINFKGYL VGNGVTDEVF DGNALVPFTH GMGLISDELY EETKLVCNGT YYTGGQSGVS KECAGKLKTV SDTVNLLNLY NILEPCYHGT SLSALDIEFL
301: PKSLLTLGKT EKPMAVRKRM FGRAWPLGAV VRPGIVPSWS QLLAGFGVPC IDDTVATKWL NDPAVRKAVH AKEVSIQFII FLSISISIGN WELCSSNLEY
401: RHDTGSMIEY HRNLTLSGFR ALIFSGDHDM CVPYTGSEAW TKAMGYKVVD EWRPWMSNNQ VAGFTQGYAN NLTFLTIKGA GHTVPEYKPR ESLDFYSRFL
501: AGEKI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)