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AT3G25190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Vacuolar iron transporter (VIT) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Vacuolar iron transporter (VIT) family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); BEST Arabidopsis thaliana protein match is: Vacuolar iron transporter (VIT) family protein (TAIR:AT3G43660.1); Has 1809 Blast hits to 1804 proteins in 621 species: Archae - 86; Bacteria - 1207; Metazoa - 0; Fungi - 93; Plants - 206; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink).
Protein Annotations
BioGrid:7443eggNOG:COG1814eggNOG:KOG4473EMBL:AB026647EMBL:AF375396EMBL:AY066047EMBL:CP002686
EnsemblPlants:AT3G25190EnsemblPlants:AT3G25190.1entrez:822112GeneID:822112Genevisible:Q9LSF6GO:GO:0005381GO:GO:0005384
GO:GO:0005774GO:GO:0006880GO:GO:0010039GO:GO:0016020GO:GO:0016021GO:GO:0030026GO:GO:0034755
GO:GO:0071281GO:GO:0071369GO:GO:0071421GO:GO:0071732Gramene:AT3G25190.1hmmpanther:PTHR31851hmmpanther:PTHR31851:SF6
HOGENOM:HOG000096548InParanoid:Q9LSF6IntAct:Q9LSF6InterPro:IPR008217KEGG:ath:AT3G25190OMA:VKAMLLVPaxDb:Q9LSF6
Pfam:PF01988Pfam:Q9LSF6PhylomeDB:Q9LSF6PRIDE:Q9LSF6PRO:PR:Q9LSF6Proteomes:UP000006548RefSeq:NP_189156.1
STRING:3702.AT3G25190.1TAIR:AT3G25190TCDB:2.A.89.3.5TMHMM:TMhelixUniGene:At.28448UniProt:Q9LSF6
Coordinates (TAIR10) chr3:+:9174505..9175614
Molecular Weight (calculated) 23212.60 Da
IEP (calculated) 8.75
GRAVY (calculated) 0.33
Length 219 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSNVQLSET NSPRNQKTRP RAEKEEVDYM QRAQWLRAAL LGANDGLVTV ASLMMGVGSI KEDVKAMLLV GFAGLVAGAC SMAIGEFVSV CTQRDIETAQ
101: MKRAIEHKTS LSAIDEQEEE EKKERLPNPG QAAIASALAF SVGAAMPLLG AVFIENHKVR MVVVAVVATI ALVVFGVTGA VLGKTSVVKS SVRVVIGGWM
201: AMALTFGLTK FIGSAAMQI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)