AT3G24790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.953 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G07070.1); Has 116071 Blast hits to 114660 proteins in 4323 species: Archae - 99; Bacteria - 13128; Metazoa - 43073; Fungi - 9937; Plants - 33033; Viruses - 314; Other Eukaryotes - 16487 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:9052996..9054531 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40519.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.23 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||||||||||
| Length | 363 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPAPYKQPNS PKRTTGEVVA KNANGPSNNM GARIFTFREL ATATKNFRQE CLIGEGGFGR VYKGKLENPA QVVAVKQLDR NGLQGQREFL VEVLMLSLLH 101: HRNLVNLIGY CADGDQRLLV YEYMPLGSLE DHLLDLEPGQ KPLDWNTRIK IALGAAKGIE YLHDEADPPV IYRDLKSSNI LLDPEYVAKL SDFGLAKLGP 201: VGDTLHVSSR VMGTYGYCAP EYQRTGYLTN KSDVYSFGVV LLELISGRRV IDTMRPSHEQ NLVTWALPIF RDPTRYWQLA DPLLRGDYPE KSLNQAIAVA 301: AMCLHEEPTV RPLMSDVITA LSFLGASSNS SNTGSNHLQQ NRSNKYQDAV QWDSSPRYAN SQM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)