AT3G24715.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.994 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: PB1 domain-containing protein tyrosine kinase (TAIR:AT1G04700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:9025849..9029948 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 124868.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.69 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.69 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1117 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MSDRWARQNA ERPATTLAER RNVNKNVSLQ TGEEFSMEFL KDHTPVQSPI VAGRTHNDVH RFGDLYYQNQ PQGYDSAARF HELRRIESEC PSDAYDFGRD 0101: PRSTIRLENG GYMPHFNAYH NVGCDKEVIT RKAFGEINSN RGDVTGMSAP CVFLPERTQS NNFTGGGGDF DRFGKVKFLC SFGGRIMPRS TDEKLKYVGG 0201: ETHIISIRKN LSWEELKKKT SAICQQLHSI KYQLPGDELD SLISVSSDED LQNMIEEYNG LERLEGSQRP RLFLIPIGEP ERKAQQNIPD CQYAAALNCN 0301: ADPNPRNISD GQTLAGDSRY HINNLDRNPS FCKRTPGQML RLDATAMRPN PLFNGVQYNM ASYPSPPVSP SPFQQRDSNG AYSQFHGNNS SSESNNSFTP 0401: AQQDTSIFEV IDSKYHQQRP LPSVNYQSNK QEAENLYGIQ FQNGFNDKPV TPNLGHVDNL CFNPERSANN GRVFYDKVSM PEESKVSFSG STNSNDSCLG 0501: IPHSYSDSTL EITGGHSSYF SQERQQSPSS TLNFTKKQTQ EKQVQVHRNN DLADRRTQSD ILDMKSTEGG ETMFKFSPSP RGPRLSGENK TLHIDISAAG 0601: NHYDEIYLNQ ETKNQGGNSD TIFHLGGKVL GTRAMPTDME GKKLPIYGNQ TSVVVDPWKQ IKQDNERLMA GAGTSSANLI SLEEGIAANT PNEEPESRAA 0701: RERNLEVSGI FISKRVVSDE NFLFSIASES PNSKIVHETQ KNRTEREGGL GHVRIPIMDL NQPAPATASE TYSLKTPRED SPQSIPHAKI TSGDTIFLSE 0801: EAEANTGQKE NSFKDTLFVE MEASVYGLQI IKNADLEDLT ELGSGTYGTV YHGTWRGTDV AIKRIRNSCF AGRSSEQERL TKDFWREAQI LSNLHHPNVV 0901: AFYGIVPDGT GGTLATVTEF MVNGSLRHAL LKKDRLLDTR KKIIIAMDAA FGMEYLHSKN IVHFDLKCEN LLVNLRDPQR PICKVGDLGL SRIKRNTLVS 1001: GGVRGTLPWM APELLNGSST RVSEKVDVFS YGISLWEILT GEEPYADMHC GAIIGGIVKN TLRPPIPKSC SPEWKKLMEQ CWSVDPDSRP PFTEITCRLR 1101: SMSMEVVTKS KRRENKP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)