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AT3G24710.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.641
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Flavodoxin family protein (TAIR:AT3G02280.1); Has 175 Blast hits to 175 proteins in 21 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 168; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0369eggNOG:KOG1159EMBL:CP002686EnsemblPlants:AT3G24710
EnsemblPlants:AT3G24710.1entrez:822068GeneID:822068Gramene:AT3G24710.1
hmmpanther:PTHR19384hmmpanther:PTHR19384:SF10InParanoid:F4J7R4KEGG:ath:AT3G24710
OMA:CNGAAVYPaxDb:F4J7R4ProteinModelPortal:F4J7R4Proteomes:UP000006548
RefSeq:NP_189114.2SMR:F4J7R4STRING:3702.AT3G24710.1SUPFAM:SSF52343
TAIR:AT3G24710UniGene:At.53470UniProt:F4J7R4
Coordinates (TAIR10) chr3:-:9024167..9024367
Molecular Weight (calculated) 7152.48 Da
IEP (calculated) 4.67
GRAVY (calculated) -0.21
Length 66 amino acids
Sequence (TAIR10)
(BLAST)
1: MSKKVWDLLC DGAVVYVAGS STEMPSDVMS ALGEIVSEET GGSKEVASRR LKALEKAQRY NVEAWS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)