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AT3G24660.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : transmembrane kinase-like 1
Curator
Summary (TAIR10)
member of Receptor kinase-like protein family
Computational
Description (TAIR10)
transmembrane kinase-like 1 (TMKL1); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: inflorescence meristem receptor-like kinase 2 (TAIR:AT3G51740.1); Has 102882 Blast hits to 72978 proteins in 2721 species: Archae - 76; Bacteria - 8021; Metazoa - 22133; Fungi - 3923; Plants - 58593; Viruses - 201; Other Eukaryotes - 9935 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G24660-MONOMERBioGrid:7393eggNOG:ENOG410IF3BeggNOG:ENOG4111F3AEMBL:AP000740EMBL:AY090945EMBL:CP002686
EMBL:X72863EnsemblPlants:AT3G24660EnsemblPlants:AT3G24660.1entrez:822062Gene3D:3.80.10.10GeneID:822062Genevisible:P33543
GO:GO:0004672GO:GO:0005524GO:GO:0005886GO:GO:0009506GO:GO:0016021Gramene:AT3G24660.1HOGENOM:HOG000116554
InParanoid:P33543InterPro:IPR000719InterPro:IPR001245InterPro:IPR001611InterPro:IPR011009InterPro:IPR013210InterPro:IPR032675
iPTMnet:P33543KEGG:ath:AT3G24660OMA:SWNSSVPPaxDb:P33543Pfam:P33543Pfam:PF07714Pfam:PF08263
Pfam:PF13855Pfscan:PS50011PhylomeDB:P33543PIR:S39476PRIDE:P33543PRO:PR:P33543PROSITE:PS50011
ProteinModelPortal:P33543Proteomes:UP000006548RefSeq:NP_189109.1SMR:P33543STRING:3702.AT3G24660.1SUPFAM:SSF52058SUPFAM:SSF56112
TAIR:AT3G24660tair10-symbols:TMKL1TMHMM:TMhelixUniGene:At.196UniGene:At.43520UniProt:P33543
Coordinates (TAIR10) chr3:+:9003641..9005751
Molecular Weight (calculated) 73357.40 Da
IEP (calculated) 6.17
GRAVY (calculated) -0.08
Length 674 amino acids
Sequence (TAIR10)
(BLAST)
001: MGMEALRFLH VIFFFVLILH CHCGTSLSGS SDVKLLLGKI KSSLQGNSES LLLSSWNSSV PVCQWRGVKW VFSNGSPLQC SDLSSPQWTN TSLFNDSSLH
101: LLSLQLPSAN LTGSLPREIG EFSMLQSVFL NINSLSGSIP LELGYTSSLS DVDLSGNALA GVLPPSIWNL CDKLVSFKIH GNNLSGVLPE PALPNSTCGN
201: LQVLDLGGNK FSGEFPEFIT RFKGVKSLDL SSNVFEGLVP EGLGVLELES LNLSHNNFSG MLPDFGESKF GAESFEGNSP SLCGLPLKPC LGSSRLSPGA
301: VAGLVIGLMS GAVVVASLLI GYLQNKKRKS SIESEDDLEE GDEEDEIGEK EGGEGKLVVF QGGENLTLDD VLNATGQVME KTSYGTVYKA KLSDGGNIAL
401: RLLREGTCKD RSSCLPVIRQ LGRIRHENLV PLRAFYQGKR GEKLLIYDYL PNISLHDLLH ESKPRKPALN WARRHKIALG IARGLAYLHT GQEVPIIHGN
501: IRSKNVLVDD FFFARLTEFG LDKIMVQAVA DEIVSQAKSD GYKAPELHKM KKCNPRSDVY AFGILLLEIL MGKKPGKSGR NGNEFVDLPS LVKAAVLEET
601: TMEVFDLEAM KGIRSPMEEG LVHALKLAMG CCAPVTTVRP SMEEVVKQLE ENRPRNRSAL YSPTETRSDA ETPF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)