suba logo
AT3G24590.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : plastidic type i signal peptidase 1
Curator
Summary (TAIR10)
Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).
Computational
Description (TAIR10)
plastidic type i signal peptidase 1 (PLSP1); FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis, thylakoid membrane organization, protein maturation; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, plastid envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I, conserved site (InterPro:IPR019758), Peptidase S26, conserved region (InterPro:IPR019533), Peptidase S26A, signal peptidase I (InterPro:IPR000223), Peptidase S26A, signal peptidase I, serine active site (InterPro:IPR019756); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G06870.1); Has 9773 Blast hits to 9438 proteins in 2404 species: Archae - 0; Bacteria - 7280; Metazoa - 206; Fungi - 105; Plants - 230; Viruses - 0; Other Eukaryotes - 1952 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G24590-MONOMERBRENDA:3.4.21.89EC:3.4.21.89eggNOG:COG0681eggNOG:KOG0171EMBL:AB020746EMBL:BT002007
EMBL:BT015406EMBL:CP002686EnsemblPlants:AT3G24590EnsemblPlants:AT3G24590.1entrez:822055Gene3D:2.10.109.10GeneID:822055
Genevisible:Q8H0W1GO:GO:0004252GO:GO:0006465GO:GO:0008233GO:GO:0009507GO:GO:0009526GO:GO:0009535
GO:GO:0009941GO:GO:0010027GO:GO:0016021GO:GO:0051604GO:GO:0055035Gramene:AT3G24590.1hmmpanther:PTHR12383
hmmpanther:PTHR12383:SF25HOGENOM:HOG000210357InParanoid:Q8H0W1InterPro:IPR000223InterPro:IPR015927InterPro:IPR019533InterPro:IPR019756
InterPro:IPR019758InterPro:IPR028360KEGG:ath:AT3G24590KO:K03100MEROPS:S26.A02OMA:FFPATSQPANTHER:PTHR12383
PaxDb:Q8H0W1Pfam:PF10502Pfam:Q8H0W1PhylomeDB:Q8H0W1PRIDE:Q8H0W1PRINTS:PR00727PRO:PR:Q8H0W1
PROSITE:PS00501PROSITE:PS00761ProteinModelPortal:Q8H0W1Proteomes:UP000006548RefSeq:NP_189102.2scanprosite:PS00501scanprosite:PS00761
SMR:Q8H0W1STRING:3702.AT3G24590.1SUPFAM:SSF51306TAIR:AT3G24590tair10-symbols:PLSP1TIGRfam:TIGR02227TIGRFAMs:TIGR02227
UniGene:At.37497UniProt:Q8H0W1
Coordinates (TAIR10) chr3:+:8970694..8972020
Molecular Weight (calculated) 32555.70 Da
IEP (calculated) 5.82
GRAVY (calculated) -0.32
Length 291 amino acids
Sequence (TAIR10)
(BLAST)
001: MMVMISLHFS TPPLAFLKSD SNSRFLKNPN PNFIQFTPKS QLLFPQRLNF NTGTNLNRRT LSCYGIKDSS ETTKSAPSLD SGDGGGGDGG DDDKGEVEEK
101: NRLFPEWLDF TSDDAQTVFV AIAVSLAFRY FIAEPRYIPS LSMYPTFDVG DRLVAEKVSY YFRKPCANDI VIFKSPPVLQ EVGYTDADVF IKRIVAKEGD
201: LVEVHNGKLM VNGVARNEKF ILEPPGYEMT PIRVPENSVF VMGDNRNNSY DSHVWGPLPL KNIIGRSVFR YWPPNRVSGT VLEGGCAVDK Q
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)