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AT3G24190.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid
  • PMID:22274653 (2012): plastid plastid stroma plastoglobules
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G79600.1); Has 10148 Blast hits to 10096 proteins in 1818 species: Archae - 124; Bacteria - 4457; Metazoa - 440; Fungi - 485; Plants - 717; Viruses - 16; Other Eukaryotes - 3909 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1372-MONOMEReggNOG:COG0661eggNOG:KOG1235EMBL:AB028621EMBL:AF410316EMBL:AY113003EMBL:CP002686
EnsemblPlants:AT3G24190EnsemblPlants:AT3G24190.1entrez:822005GeneID:822005GO:GO:0004672GO:GO:0005524GO:GO:0009507
Gramene:AT3G24190.1hmmpanther:PTHR10566hmmpanther:PTHR10566:SF86HOGENOM:HOG000232962InterPro:IPR000719InterPro:IPR002575InterPro:IPR004147
InterPro:IPR011009KEGG:ath:AT3G24190KO:K08869ncoils:CoilOMA:WQAIYSEPfam:PF01636Pfam:PF03109
Pfscan:PS50011PhylomeDB:Q9LRN0PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_566745.1SMR:Q9LRN0STRING:3702.AT3G24190.1
SUPFAM:SSF56112TAIR:AT3G24190UniGene:At.37575UniGene:At.5560UniProt:Q9LRN0
Coordinates (TAIR10) chr3:+:8743319..8747703
Molecular Weight (calculated) 87441.80 Da
IEP (calculated) 5.18
GRAVY (calculated) -0.00
Length 793 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAAVPRLVN CGPEPIRFSV SSRRSFVSGI PHRNKRSRQI LAVATDPKPT QTSPPKSTTV NGSSSPSSAS KVVNNNVSTR INDVSKEIKR VRAQMEEDEQ
101: LSVLMRGLRG QNLKDSVFAD DNIQLRLVET GESSEFLPLV YDPETISAYW GKRPRAVASR VIQLLSVAGG FLSRIAGDVI NKKVKENEVA RAIELREIVT
201: SLGPAYIKLG QALSIRPDIL SPAAMTELQK LCDKVPSYPD DVAMALIEEE LGKPWYDVYS ELSPSPIAAA SLGQVYKGRL KENGDLVAVK VQRPFVLETV
301: TVDLFVIRNL GLFLRKFPQV SVDVVGLVDE WAARFFEELD YVNEGENGTY FAEMMKKDLP QVVVPKTYQK YTSRKVLTTS WIDGEKLSQS IESDVGELVN
401: VGVICYLKQL LDTGFFHADP HPGNMIRTPD GKLAILDFGL VTKLTDDQKY GMIEAIAHLI HRDYDAIVKD FVKLGFIPDG VNLAPILPVL AKVFDQALEG
501: GGAKNINFQE LAADLAQITF DYPFRIPPYF ALIIRAIGVL EGIALVGNPE FAIVDEAYPY IAQRLLTDES PRLREALRYT IYGKTGVFDA ERFIDVMQAF
601: ETFITAAKSG GGEDMNGGMA EMALMQSKTS SLVPMFPASA SQPDQPVQTR VALSFLLSEK GNFFREFLLD EIVKGIDAIT REQLVQAMAV FGFRNATPIF
701: GMLPPTLGPF KPAALLPSVT EEDKVILNNV QKVIEFLTAR SSMSNNPDQV VDVSQVVREL LPVLPGISAT VLPEILSRLG SRVMARIVRD AFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)