AT3G24090.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases; FUNCTIONS IN: sugar binding, transaminase activity, glutamine-fructose-6-phosphate transaminase (isomerizing) activity; INVOLVED IN: carbohydrate biosynthetic process, carbohydrate metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Sugar isomerase (SIS) (InterPro:IPR001347), Glucosamine-fructose-6-phosphate aminotransferase, isomerising (InterPro:IPR005855), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 19000 Blast hits to 18984 proteins in 2800 species: Archae - 500; Bacteria - 10467; Metazoa - 411; Fungi - 223; Plants - 106; Viruses - 14; Other Eukaryotes - 7279 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:8697838..8700971 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 74609.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.38 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 677 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MCGIFAYLNF HANKERRYIL DVLFNGLRRL EYRGYDSAGI AIDNSSPSSS PLVFRQAGNI ESLVNSVNEE ITNTDLNLDE VFYFHAGIAH TRWATHGEPA 101: PRNSHPQSSG PGDDFLVVHN GVITNYEVLK ETLVRHGFTF ESDTDTEVIP KLAKFVFDKA NEEGGQTVTF CEVVFEVMRH LEGAYALIFK SWHYPNELIA 201: CKLGSPLLLG VKELDQGESN SHVFQDAHFL SKNDHPKEFF LSSDPHALVE HTKKVLVIED GEVVNLKDGG VSILKFENER GRCNGLSRPA SVERALSVLE 301: MEVEQISKGK YDHYMQKEIH EQPESLTTTM RGRLIRGGSR KTKTVLLGGL KDHLKTIRRS RRIVFIGCGT SYNAALASRP ILEELSGIPV SMEIASDLWD 401: RQGPIYREDT AVFVSQSGET ADTLLALDYA RENGALCVGI TNTVGSSIAR KTHCGVHINA GAEIGVASTK AYTSQIVVMV MLALAIGSDT ISSQKRREAI 501: IDGLLDLPYK VKEVLKLDDE MKDLAQLLID EQSLLVFGRG YNYATALEGA LKVKEVALMH SEGILAGEMK HGPLALVDEN LPIAVIATRD ACFSKQQSVI 601: QQLHARKGRL IVMCSKGDAA SVSSSGSCRA IEVPQVEDCL QPVINIVPLQ LLAYHLTVLR GHNVDQPRNL AKSVTTQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)