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AT3G24080.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : KRR1 family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
KRR1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KRR1 interacting protein 1, subgroup (InterPro:IPR007851), KRR1 interacting protein 1 (InterPro:IPR018034); Has 58267 Blast hits to 33525 proteins in 1602 species: Archae - 251; Bacteria - 4220; Metazoa - 24830; Fungi - 6847; Plants - 2500; Viruses - 358; Other Eukaryotes - 19261 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XR4GeggNOG:KOG2409EMBL:CP002686EnsemblPlants:AT3G24080EnsemblPlants:AT3G24080.1entrez:821994ExpressionAtlas:F4J5D3
GeneID:821994GO:GO:0005829Gramene:AT3G24080.1hmmpanther:PTHR14490InParanoid:F4J5D3InterPro:IPR018034InterPro:IPR024626
ncoils:CoilOMA:KETRFFNPANTHER:PTHR14490PaxDb:F4J5D3Pfam:PF05178Pfam:PF12936PRIDE:F4J5D3
ProteinModelPortal:F4J5D3Proteomes:UP000006548RefSeq:NP_189050.2STRING:3702.AT3G24080.1TAIR:AT3G24080UniGene:At.37597UniProt:F4J5D3
Coordinates (TAIR10) chr3:-:8695191..8697107
Molecular Weight (calculated) 74963.30 Da
IEP (calculated) 4.45
GRAVY (calculated) -1.49
Length 638 amino acids
Sequence (TAIR10)
(BLAST)
001: MMGRPKAIPD DDDGELSQFK GFDVDNDFAK RLLHNKERED LQRYEEKNKQ GLFSESEEEP ETESEPDSDL GNPESNLKFV DLLIKVKKKD PIIKDKDAKF
101: YEYDDESSEE DEVDKKDTKK KKKKKKMYLK DVQAQHLLEG GPEFVEEDEE RKVRTYAEEQ KETRKAVTDA WKAEGNESGE DDDFLRVVEK EGDDDVEVDE
201: ELAKKMDEYY GDEAEATENQ FLKDYLVKQL WKEKEERVPG EEELKELSED DHEVWDQEDF EAGRPLDLLN YRHEDENAGD TVMGQSRVVE GSVRKKDNAR
301: KAQRKNKDER MKKEDDVRKE ELKRLKNVKK KEIKEKMKKV LSVAGFKDGE ECPLDAKDFD DEFDPEEYDK MMKAAFDDKY YGEEDSDLNS DEDDDGEKPD
401: FDKEDELLGL PKDWDVTKGG DVFAAAREKV LKHKENMLGI DEEEEEDEEE EEDEEEEEVD EEKEAEGKRK RKRKTSLVQK TKEALMEEYY KLDYEDTIGE
501: LRTRFKYAKV QPNRFELDTG EILTLDDAEL NQYVPLKKMA PYVEKDWEVN RHKVKEQKRK IRELWEGKHD EKKSKKRKKN DVVETKPTPK EAEAEAEAEA
601: EAEAEAEAEA KLSRKAKRRR RQAEKKLPPS RMAAYGKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)