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AT3G23980.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : BLISTER
Curator
Summary (TAIR10)
Encodes a protein that interacts with the Polycomb-group (Pc-G) histone methyltransferase CLF (CURLY LEAF). It colocalizes with CLF to the nucleus and represses a subset of Pc-G target genes. The pleiotropic developmental mutant phenotype suggests that BLI prevents premature differentiation.
Computational
Description (TAIR10)
BLISTER (BLI); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: flower development, seed development, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 32015 Blast hits to 19612 proteins in 1632 species: Archae - 290; Bacteria - 4748; Metazoa - 14972; Fungi - 3061; Plants - 1469; Viruses - 92; Other Eukaryotes - 7383 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGCKeggNOG:ENOG4111GN4EMBL:AP001297EMBL:CP002686EnsemblPlants:AT3G23980EnsemblPlants:AT3G23980.1entrez:821982
GeneID:821982GO:GO:0005634GO:GO:0005829GO:GO:0006355GO:GO:0009908GO:GO:0009965GO:GO:0010091
GO:GO:0048316GO:GO:0048826GO:GO:0051781Gramene:AT3G23980.1hmmpanther:PTHR19306hmmpanther:PTHR19306:SF4HOGENOM:HOG000238596
InterPro:IPR033268KEGG:ath:AT3G23980ncoils:CoilOMA:VIHNINTPANTHER:PTHR19306PhylomeDB:Q9LIQ9Proteomes:UP000006548
RefSeq:NP_189040.3STRING:3702.AT3G23980.1TAIR:AT3G23980tair10-symbols:BLItair10-symbols:KOS1UniGene:At.27950UniProt:Q9LIQ9
Coordinates (TAIR10) chr3:-:8662818..8667440
Molecular Weight (calculated) 78388.60 Da
IEP (calculated) 4.80
GRAVY (calculated) -0.77
Length 714 amino acids
Sequence (TAIR10)
(BLAST)
001: MASATSSRRQ EDVEAGRRKL EQFRKRKAAE KAKKASQNTQ PVDNSQQSVI DSDGAGASIS NGPLKQSAES TSNETHTKDV YNLSFSNTAM DDGSKERSRQ
101: DDGQESVGKV DFSNSLELIG SSKDLTVNTR PEVVPYSNID KQSSESFDRA STLRETASLF SGTSMQMDGF IHGSGLTSSR KDSLQPTTRM AGSFDEVAKN
201: QQGSGELGGS IVQKPTLSSS YLFNSPDTSS RPSEPSDFSV NITSSSPLNS AKSEATVKRS RPSFLDSLNI SRAPETQYQH PEIQADLVTS SGSQLSGSDG
301: FGPSYISGRR DSNGPSSLTS GASDYPNPFE KFRSSLYPAA NGVMPGFTDF SMPKQNDDFT ALEQHIEDLT QEKFSLQRDL DASRALAESL ASENSSMTDT
401: YNQQRGLVNQ LKDDMERLYQ QIQAQMGELE SVRVEYANAQ LECNAADERS QILASEVISL EDKALRLRSN ELKLERELEK AQTEMLSYKK KLQSLEKDRQ
501: DLQSTIKALQ EEKKVLQTMV QKASSGGKST DLSKNSTSRK NVSTSTEGLA ISDTTPESSN QETDSTTLLE SDSSNTAIIP ETRQLTLEGF SLSVPADQMR
601: VIHNINTLIA ELAIEKEELV QALSSELSRS AHVQELNKEL SRKLEAQTQR LELVTAQKMA IDNVSPEKQQ PDTHVVQERT PIADEGDEVV ERVLGWIMKM
701: FPGGPSKRRT SKLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)