AT3G23980.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : BLISTER | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein that interacts with the Polycomb-group (Pc-G) histone methyltransferase CLF (CURLY LEAF). It colocalizes with CLF to the nucleus and represses a subset of Pc-G target genes. The pleiotropic developmental mutant phenotype suggests that BLI prevents premature differentiation. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
BLISTER (BLI); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: flower development, seed development, regulation of transcription, DNA-dependent, leaf morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 32015 Blast hits to 19612 proteins in 1632 species: Archae - 290; Bacteria - 4748; Metazoa - 14972; Fungi - 3061; Plants - 1469; Viruses - 92; Other Eukaryotes - 7383 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:8662818..8667440 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78388.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.80 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.77 | ||||||||||||||||||||||||||||||||||||
| Length | 714 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASATSSRRQ EDVEAGRRKL EQFRKRKAAE KAKKASQNTQ PVDNSQQSVI DSDGAGASIS NGPLKQSAES TSNETHTKDV YNLSFSNTAM DDGSKERSRQ 101: DDGQESVGKV DFSNSLELIG SSKDLTVNTR PEVVPYSNID KQSSESFDRA STLRETASLF SGTSMQMDGF IHGSGLTSSR KDSLQPTTRM AGSFDEVAKN 201: QQGSGELGGS IVQKPTLSSS YLFNSPDTSS RPSEPSDFSV NITSSSPLNS AKSEATVKRS RPSFLDSLNI SRAPETQYQH PEIQADLVTS SGSQLSGSDG 301: FGPSYISGRR DSNGPSSLTS GASDYPNPFE KFRSSLYPAA NGVMPGFTDF SMPKQNDDFT ALEQHIEDLT QEKFSLQRDL DASRALAESL ASENSSMTDT 401: YNQQRGLVNQ LKDDMERLYQ QIQAQMGELE SVRVEYANAQ LECNAADERS QILASEVISL EDKALRLRSN ELKLERELEK AQTEMLSYKK KLQSLEKDRQ 501: DLQSTIKALQ EEKKVLQTMV QKASSGGKST DLSKNSTSRK NVSTSTEGLA ISDTTPESSN QETDSTTLLE SDSSNTAIIP ETRQLTLEGF SLSVPADQMR 601: VIHNINTLIA ELAIEKEELV QALSSELSRS AHVQELNKEL SRKLEAQTQR LELVTAQKMA IDNVSPEKQQ PDTHVVQERT PIADEGDEVV ERVLGWIMKM 701: FPGGPSKRRT SKLL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)