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AT3G23810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22215637 (2012): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : S-adenosyl-l-homocysteine (SAH) hydrolase 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-l-homocysteine (SAH) hydrolase 2 (SAHH2); FUNCTIONS IN: adenosylhomocysteinase activity; INVOLVED IN: one-carbon metabolic process; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosyl-L-homocysteine hydrolase (InterPro:IPR000043), S-adenosyl-L-homocysteine hydrolase, conserved site (InterPro:IPR020082), S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-homocysteine hydrolase (TAIR:AT4G13940.1); Has 7939 Blast hits to 7933 proteins in 1466 species: Archae - 229; Bacteria - 2315; Metazoa - 640; Fungi - 145; Plants - 247; Viruses - 0; Other Eukaryotes - 4363 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G23810-MONOMERBioGrid:7296EC:3.3.1.1eggNOG:COG0499
eggNOG:KOG1370EMBL:AF428329EMBL:AP000377EMBL:AY050783
EMBL:AY059888EMBL:AY093385EMBL:AY094404EMBL:AY150471
EMBL:CP002686EnsemblPlants:AT3G23810EnsemblPlants:AT3G23810.1entrez:821964
Gene3D:3.40.50.720GeneID:821964Genevisible:Q9LK36GO:GO:0004013
GO:GO:0005773GO:GO:0005829GO:GO:0005886GO:GO:0006730
GO:GO:0016020GO:GO:0033353Gramene:AT3G23810.1gramene_pathway:3.3.1.1
gramene_pathway:PWY-5041gramene_plant_reactome:1119501gramene_plant_reactome:6876108HAMAP:MF_00563
hmmpanther:PTHR23420HOGENOM:HOG000227986InParanoid:Q9LK36InterPro:IPR000043
InterPro:IPR015878InterPro:IPR016040InterPro:IPR020082iPTMnet:Q9LK36
KEGG:00270+3.3.1.1KEGG:ath:AT3G23810KO:K01251OMA:VSCVTEF
PANTHER:PTHR23420PaxDb:Q9LK36Pfam:PF00670Pfam:PF05221
Pfam:Q9LK36PhylomeDB:Q9LK36PIRSF:PIRSF001109PRIDE:Q9LK36
PRO:PR:Q9LK36PROSITE:PS00738PROSITE:PS00739ProteinModelPortal:Q9LK36
Proteomes:UP000006548Reactome:R-ATH-156581Reactome:R-ATH-1614635RefSeq:NP_189023.1
scanprosite:PS00738scanprosite:PS00739SMART:SM00996SMART:SM00997
SMR:Q9LK36STRING:3702.AT3G23810.1SUPFAM:SSF51735SUPFAM:SSF52283
TAIR:AT3G23810tair10-symbols:ATSAHH2tair10-symbols:SAHH2TIGRfam:TIGR00936
TIGRFAMs:TIGR00936UniGene:At.24845UniGene:At.67005UniPathway:UPA00314
UniProt:Q9LK36
Coordinates (TAIR10) chr3:-:8588013..8589671
Molecular Weight (calculated) 53162.20 Da
IEP (calculated) 5.49
GRAVY (calculated) -0.09
Length 485 amino acids
Sequence (TAIR10)
(BLAST)
001: MALLVEKTSS GREYKVKDMS QADFGRLEIE LAEVEMPGLV SCVTEFGPSQ PLKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFAKN GTFPDPTSTD NPEFQIVLSI IKDGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FCTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PDTNSGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKSSG KYEKKVYVLP KHLDEKVAAL HLGKLGARLT KLTKDQSDYV SIPVEGPYKP VHYRY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)