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AT3G23750.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : plasma membrane 16618929
AmiGO : plasma membrane 17317660
AmiGO : plasma membrane 17644812
TAIR : plasma membrane 17317660
TAIR : plasma membrane 16618929
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: transmembrane kinase 1 (TAIR:AT1G66150.1); Has 176104 Blast hits to 138784 proteins in 5021 species: Archae - 174; Bacteria - 16889; Metazoa - 56819; Fungi - 11325; Plants - 68733; Viruses - 454; Other Eukaryotes - 21710 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G23750-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410IJ86EMBL:AP000377EMBL:CP002686EMBL:FJ708726
EnsemblPlants:AT3G23750EnsemblPlants:AT3G23750.1entrez:821957Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:821957Genevisible:Q9LK43
GO:GO:0004674GO:GO:0005524GO:GO:0005794GO:GO:0005886GO:GO:0009506GO:GO:0016021Gramene:AT3G23750.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF172HOGENOM:HOG000240631InParanoid:Q9LK43InterPro:IPR000719InterPro:IPR001245InterPro:IPR001611
InterPro:IPR003591InterPro:IPR008271InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441InterPro:IPR032675
iPTMnet:Q9LK43KEGG:ath:AT3G23750OMA:QGPLPLFPaxDb:Q9LK43Pfam:PF07714Pfam:PF08263Pfam:PF13855
Pfscan:PS50011PhylomeDB:Q9LK43PRIDE:Q9LK43PRO:PR:Q9LK43PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q9LK43Proteomes:UP000006548RefSeq:NP_189017.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMART:SM00369
SMR:Q9LK43STRING:3702.AT3G23750.1SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT3G23750TMHMM:TMhelixUniGene:At.37659
UniProt:Q9LK43
Coordinates (TAIR10) chr3:+:8558332..8561263
Molecular Weight (calculated) 99969.90 Da
IEP (calculated) 5.44
GRAVY (calculated) -0.10
Length 928 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAPTPLLLL VLLTTITFFT TSVADDQTAM LALAKSFNPP PSDWSSTTDF CKWSGVRCTG GRVTTISLAD KSLTGFIAPE ISTLSELKSV SIQRNKLSGT
101: IPSFAKLSSL QEIYMDENNF VGVETGAFAG LTSLQILSLS DNNNITTWSF PSELVDSTSL TTIYLDNTNI AGVLPDIFDS LASLQNLRLS YNNITGVLPP
201: SLGKSSIQNL WINNQDLGMS GTIEVLSSMT SLSQAWLHKN HFFGPIPDLS KSENLFDLQL RDNDLTGIVP PTLLTLASLK NISLDNNKFQ GPLPLFSPEV
301: KVTIDHNVFC TTKAGQSCSP QVMTLLAVAG GLGYPSMLAE SWQGDDACSG WAYVSCDSAG KNVVTLNLGK HGFTGFISPA IANLTSLKSL YLNGNDLTGV
401: IPKELTFMTS LQLIDVSNNN LRGEIPKFPA TVKFSYKPGN ALLGTNGGDG SSPGTGGASG GPGGSSGGGG SKVGVIVGVI VAVLVFLAIL GFVVYKFVMK
501: RKYGRFNRTD PEKVGKILVS DAVSNGGSGN GGYANGHGAN NFNALNSPSS GDNSDRFLLE GGSVTIPMEV LRQVTNNFSE DNILGRGGFG VVYAGELHDG
601: TKTAVKRMEC AAMGNKGMSE FQAEIAVLTK VRHRHLVALL GYCVNGNERL LVYEYMPQGN LGQHLFEWSE LGYSPLTWKQ RVSIALDVAR GVEYLHSLAQ
701: QSFIHRDLKP SNILLGDDMR AKVADFGLVK NAPDGKYSVE TRLAGTFGYL APEYAATGRV TTKVDVYAFG VVLMEILTGR KALDDSLPDE RSHLVTWFRR
801: ILINKENIPK ALDQTLEADE ETMESIYRVA ELAGHCTARE PQQRPDMGHA VNVLGPLVEK WKPSCQEEEE SFGIDVNMSL PQALQRWQNE GTSSSTMFHG
901: DFSYSQTQSS IPPKASGFPN TFDSADGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)