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AT3G22890.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.500
plastid 0.500
ASURE: cytosol,plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23851315 (2013): plastid
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:17317660 (2007): plasma membrane
  • PMID:16207701 (2006): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP sulfurylase 1
Curator
Summary (TAIR10)
encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis.
Computational
Description (TAIR10)
ATP sulfurylase 1 (APS1); FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: chloroplast, plasma membrane, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 2073 Blast hits to 2070 proteins in 648 species: Archae - 98; Bacteria - 862; Metazoa - 241; Fungi - 201; Plants - 187; Viruses - 0; Other Eukaryotes - 484 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G22890-MONOMERBioCyc:MetaCyc:AT3G22890-MONOMERBioGrid:7193EC:2.7.7.4eggNOG:COG2046eggNOG:KOG0636EMBL:AF198964
EMBL:AF370492EMBL:AK221133EMBL:AK226559EMBL:AP001300EMBL:AY050869EMBL:AY054169EMBL:AY064648
EMBL:AY085975EMBL:AY091207EMBL:BT002538EMBL:CP002686EMBL:U05218EMBL:Z34534EnsemblPlants:AT3G22890
EnsemblPlants:AT3G22890.1entrez:821861Gene3D:3.40.50.620GeneID:821861Genevisible:Q9LIK9GO:GO:0000103GO:GO:0001887
GO:GO:0004781GO:GO:0005524GO:GO:0005886GO:GO:0009507GO:GO:0009570GO:GO:0009735GO:GO:0046686
GO:GO:0070814Gramene:AT3G22890.1hmmpanther:PTHR11055hmmpanther:PTHR11055:SF24HOGENOM:HOG000069045InterPro:IPR002650InterPro:IPR014729
InterPro:IPR015947InterPro:IPR024951InterPro:IPR025980KEGG:00230+2.7.7.4KEGG:00261+2.7.7.4KEGG:00450+2.7.7.4KEGG:00920+2.7.7.4
KEGG:ath:AT3G22890KO:K13811OMA:KHINLERPaxDb:Q9LIK9Pfam:PF01747Pfam:PF14306Pfam:Q9LIK9
PhylomeDB:Q9LIK9PRIDE:Q9LIK9PRO:PR:Q9LIK9ProteinModelPortal:Q9LIK9Proteomes:UP000006548RefSeq:NP_188929.1SMR:Q9LIK9
STRING:3702.AT3G22890.1SUPFAM:SSF52374SUPFAM:SSF88697TAIR:AT3G22890tair10-symbols:APS1TIGRfam:TIGR00339TIGRFAMs:TIGR00339
UniGene:At.19053UniPathway:UPA00140UniProt:Q9LIK9
Coordinates (TAIR10) chr3:+:8112837..8114734
Molecular Weight (calculated) 51461.90 Da
IEP (calculated) 6.81
GRAVY (calculated) -0.31
Length 463 amino acids
Sequence (TAIR10)
(BLAST)
001: MASMAAVLSK TPFLSQPLTK SSPNSDLPFA AVSFPSKSLR RRVGSIRAGL IAPDGGKLVE LIVEEPKRRE KKHEAADLPR VELTAIDLQW MHVLSEGWAS
101: PLGGFMRESE FLQTLHFNSL RLDDGSVVNM SVPIVLAIDD EQKARIGEST RVALFNSDGN PVAILSDIEI YKHPKEERIA RTWGTTAPGL PYVDEAITNA
201: GNWLIGGDLE VLEPVKYNDG LDRFRLSPAE LRKELEKRNA DAVFAFQLRN PVHNGHALLM TDTRRRLLEM GYKNPILLLH PLGGFTKADD VPLDWRMKQH
301: EKVLEDGVLD PETTVVSIFP SPMHYAGPTE VQWHAKARIN AGANFYIVGR DPAGMGHPVE KRDLYDADHG KKVLSMAPGL ERLNILPFRV AAYDKTQGKM
401: AFFDPSRPQD FLFISGTKMR TLAKNNENPP DGFMCPGGWK VLVDYYESLT PAGNGRLPEV VPV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)