AT3G22790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.954 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Kinase interacting (KIP1-like) family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting (KIP1-like) family protein (TAIR:AT4G14760.1); Has 216725 Blast hits to 82224 proteins in 3436 species: Archae - 3482; Bacteria - 43267; Metazoa - 93913; Fungi - 17447; Plants - 11833; Viruses - 1017; Other Eukaryotes - 45766 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:8052446..8057888 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 198863.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.00 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||||||||||||||||||||||
| Length | 1728 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MATVLHSESR RLYSWWWDSH IPKNSKWIQQ NLSDMDSKVK AMIKLIEEDA DSFARRAEMY YKKRPELMKL VEEFYRAYRA LAERYDHATV ELCHAHKTMA 0101: EAFPNQVPFD MIEDSASSSC SEPRTPEKMP PGIQPFYDSD SATSKRGLSQ LTEYLGNSET EVESLKRTLV ELGAEKEALN LQYQLSLNKF SRLEKDLEVA 0201: QKDVSGLDER ASKAEIETKI LAEALAKLEA ERDAALLRYN ESMQKITELE ESFSHAQEDV KGLTNRATKA ETEVENLKQA HSRLHSEKEA GLAEYNRCLE 0301: MISNLEKKVR DAEENAQNFS NQSAKAEDEI KALRHELVKV NEVKDGLRLR YQQCLETISK LEREVSHAQD NAKRLSSEVL AGAAKLKTVE DQCTLLESSN 0401: ETLKLEADGL THKLAAKDQE IFQKQNELEK FQSLIEDEHS RYLEIEVSLK TLQSLYSQSQ EEQKVITSEL QSRIGMLRDL ETRNLKLEGD ISSVKEENQN 0501: LSELNDSSMI FLETQKCEIS SLKEIKEKLE EEVARHINQS SAFQEEIRRL KDEIDSLNKR YQAIMEQVNL AGLDPKSLAC SVRKLQDENS KLTELCNHQS 0601: DDKDALTEKL RELDNILRKN VCLEKLLLES NTKLDGSREK TKDLQERCES LRGEKYEFIA ERANLLSQLQ IMTENMQKLL EKNSLLETSL SGANIELQCV 0701: KEKSKCFEEF FQLLKNDKAE LIKERESLIS QLNAVKEKLG VLEKKFTELE GKYADLQREK QFKNLQVEEL RVSLATEKQE RASYERSTDT RLADLQNNVS 0801: FLREECRSRK KEFEEELDRA VNAQVEIFIL QKFIEDLEQK NFSLLIECQK YAEASSFSEK LIAELESENL EQQMEAEFLV HEIDNFRGAI CQVFKALQVE 0901: ADCKTADQKI AKERIPVSRV LGEINELKCS LSSAEYETQR LVIENSVLLS LLGQFQSDGM KLESEKRDVE KDLETIVHHY GMLKKDRLEL LEMNRQLKSE 1001: LIDREQRELE LKAELQTEHL KFENLHESYM ALHQDYSDAL GKNKSLHLKF SELKGEICIL EEENGAILEE AIALNNVSVV YQSLGSEKAE QAEAFAKNLN 1101: SLQNINSGLK QKVETLEEIL KGKEVDSQEL NSKLEKLQES LEEANELNDL LEHQILVKEE TLRQKAIELL EAEEMLKATH NANAELCEAV EELRKDCKES 1201: RKLKGNLEKR NSELCDLAGR QDEEIKILSN LKENLESEVK LLHKEIQEHR VREEFLSSEL QEKSNEFGLW DAEATSFYFD LQISAVREVL LENKVQELTG 1301: VCENLKDEAV TKTTEINQIK ETVGFLEFEV SELKTQLSAY DPVVASLAED VRSLEQNALS LMKLPVPAGR RREGVQNDEH QEAAVSQEPV GHCSTNLDNG 1401: IVLLQDMKTR IKTIKQAVAE EKKRRGKLRR RSSSHRSKDR KLFEEIELED QFSGEIRQPR SPAMTESKNG SLMKDIPLDQ VADTTSYGRS RRTSRGSSDQ 1501: MLELWEEAAE PESSIKFLIN NKNSKKPLIP RLHRRSRNPS VESQSEKMVG VVDKLELSRS TEDNAKILER LLSDSRRLAS LRISLRDLKS KLEINEKPGK 1601: FTNPDFARVR KQMKEMEEAI FQLANTNEIL SNEIEETGDV RDIYRKVVME KSRIGSEKIE QMQQEMQNIE RTVLKLEEGA TKSKGRRKFS ESRTVILLRD 1701: IIHKGGKRTA RKKKNRFCGC MRSSGNEE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)