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AT3G22550.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.520
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF581)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT3G63210.1); Has 558 Blast hits to 549 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVAGeggNOG:ENOG410YIFPEMBL:AY099714EMBL:AY128875EMBL:CP002686EnsemblPlants:AT3G22550EnsemblPlants:AT3G22550.1
entrez:821826GeneID:821826Gramene:AT3G22550.1hmmpanther:PTHR33059hmmpanther:PTHR33059:SF10HOGENOM:HOG000083577IntAct:Q8L471
InterPro:IPR007650KEGG:ath:AT3G22550OMA:NCIVESQPfam:PF04570PhylomeDB:Q8L471Proteomes:UP000006548RefSeq:NP_188894.2
STRING:3702.AT3G22550.1TAIR:AT3G22550UniGene:At.37858UniProt:Q8L471
Coordinates (TAIR10) chr3:-:7991827..7992805
Molecular Weight (calculated) 29641.80 Da
IEP (calculated) 5.91
GRAVY (calculated) -0.66
Length 267 amino acids
Sequence (TAIR10)
(BLAST)
001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)