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AT3G21870.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.843
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cyclin p2;1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cyclin p2;1 (CYCP2;1); CONTAINS InterPro DOMAIN/s: Negative regulatory factor PREG (InterPro:IPR012389), Cyclin-like (InterPro:IPR011028), Cyclin-related 2 (InterPro:IPR013922), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin p4;1 (TAIR:AT2G44740.1); Has 1311 Blast hits to 1303 proteins in 220 species: Archae - 0; Bacteria - 18; Metazoa - 222; Fungi - 576; Plants - 231; Viruses - 0; Other Eukaryotes - 264 (source: NCBI BLink).
Protein Annotations
BioGrid:7074eggNOG:ENOG4111TTKeggNOG:KOG1674EMBL:AP000739EMBL:BT014779EMBL:BT015746EMBL:CP002686
EnsemblPlants:AT3G21870EnsemblPlants:AT3G21870.1entrez:821742Gene3D:1.10.472.10GeneID:821742Genevisible:Q9LJ45GO:GO:0000079
GO:GO:0007049GO:GO:0051301Gramene:AT3G21870.1hmmpanther:PTHR15615HOGENOM:HOG000239309InParanoid:Q9LJ45IntAct:Q9LJ45
InterPro:IPR012389InterPro:IPR013763InterPro:IPR013922KEGG:ath:AT3G21870OMA:VHYNNEFPaxDb:Q9LJ45Pfam:PF08613
Pfam:Q9LJ45PhylomeDB:Q9LJ45PIRSF:PIRSF027110PRIDE:Q9LJ45PRO:PR:Q9LJ45ProteinModelPortal:Q9LJ45Proteomes:UP000006548
RefSeq:NP_188825.1SMR:Q9LJ45STRING:3702.AT3G21870.1SUPFAM:SSF47954TAIR:AT3G21870tair10-symbols:CYCP2;1UniGene:At.43088
UniProt:Q9LJ45
Coordinates (TAIR10) chr3:-:7703927..7704813
Molecular Weight (calculated) 23447.40 Da
IEP (calculated) 6.62
GRAVY (calculated) 0.12
Length 210 amino acids
Sequence (TAIR10)
(BLAST)
001: MLTAAGDDEL DPVVGPESAT EAATPRVLTI ISHVMEKLVA RNEWLAKQTK GFGKSLEAFH GVRAPSISIA KYLERIYKYT KCSPACFVVG YVYIDRLAHK
101: HPGSLVVSLN VHRLLVTCVM IAAKILDDVH YNNEFYARVG GVSNADLNKM ELELLFLLDF RVTVSFRVFE SYCFHLEKEM QLNDAVSSLK DIQPMQESLS
201: PASTLSSLYV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)