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AT3G21700.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.844
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Ras-related small GTP-binding family protein
Curator
Summary (TAIR10)
Monomeric G protein. Expressed in root epidermal cells that are destined to become atrichoblasts. Also expressed during pollen development and in the pollen tube tip.
Computational
Description (TAIR10)
SGP2; FUNCTIONS IN: GTP binding; INVOLVED IN: small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Mitochondrial Rho-like (InterPro:IPR013684), GTPase, Tem1 (InterPro:IPR017231); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G54840.1); Has 225 Blast hits to 222 proteins in 54 species: Archae - 0; Bacteria - 19; Metazoa - 23; Fungi - 31; Plants - 136; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1100eggNOG:KOG1673EMBL:AY087043EMBL:CP002686EnsemblPlants:AT3G21700EnsemblPlants:AT3G21700.1entrez:821724
ExpressionAtlas:Q8LBR4Gene3D:3.40.50.300GeneID:821724GO:GO:0005525GO:GO:0005622GO:GO:0007264Gramene:AT3G21700.1
hmmpanther:PTHR24073hmmpanther:PTHR24073:SF515HOGENOM:HOG000216335InterPro:IPR001806InterPro:IPR027417KEGG:ath:AT3G21700KO:K07976
Pfam:PF00071Pfscan:PS51419PhylomeDB:Q8LBR4Proteomes:UP000006548RefSeq:NP_566690.1SMR:Q8LBR4STRING:3702.AT3G21700.3
SUPFAM:SSF52540TAIR:AT3G21700tair10-symbols:ATSGP2tair10-symbols:SGP2UniGene:At.5851UniProt:Q8LBR4
Coordinates (TAIR10) chr3:+:7644581..7646190
Molecular Weight (calculated) 32809.80 Da
IEP (calculated) 10.05
GRAVY (calculated) -0.11
Length 291 amino acids
Sequence (TAIR10)
(BLAST)
001: MAQSCLKIVR INNLRNRVNR RILILRRFTR LLWSRIVACT PGKSRRYLLL SRALPSPTVS RPSPSPIPAV DVVVGGGGGG GEFVRRSSVV YDNDNSHRRS
101: DSDLVSLKIS LLGDPEIGKT SFLAKYVGEE KEVEMRELEK GINCTDKTLY MGGARISYSI WELEAERSRD QIPVACKDSV AILFMFDLTS RCTLNSVISW
201: YQQARKSNQT AIPVMVGTKF DEFIQLPIDL QWTIASQART YAKALNATLF FSSASYNINV NKIFKFVTAK LFDLPWTVER NLTIGEPIID F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)