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AT3G21680.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.989
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JHS1eggNOG:ENOG411148WEMBL:CP002686EnsemblPlants:AT3G21680
EnsemblPlants:AT3G21680.1entrez:821722GeneID:821722Gramene:AT3G21680.1
hmmpanther:PTHR33148hmmpanther:PTHR33148:SF2HOGENOM:HOG000131704InParanoid:Q3EB28
KEGG:ath:AT3G21680OMA:GNCLRHDPaxDb:Q3EB28PRIDE:Q3EB28
Proteomes:UP000006548RefSeq:NP_188805.1TAIR:AT3G21680UniGene:At.38010
UniProt:Q3EB28
Coordinates (TAIR10) chr3:-:7633494..7633853
Molecular Weight (calculated) 13674.00 Da
IEP (calculated) 4.81
GRAVY (calculated) -1.06
Length 119 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNCLRHDNG VARKEKDDLD PEPLVKLLEE GKTSFRGEEE SERSTEEESK VVRIKVVVTK KELRQILGHK NGINSIQQLV HVLKDSGRNI SMASYEEDEK
101: EEGDENWRPT LESIPESHY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)