AT3G21650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.728 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein phosphatase 2A regulatory B subunit family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes protein phosphatase 2A (PP2A) B'zeta subunit. Targeted to mitochondria. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein phosphatase 2A regulatory B subunit family protein; FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: mitochondrion, protein phosphatase type 2A complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT4G15415.1); Has 1208 Blast hits to 1201 proteins in 208 species: Archae - 2; Bacteria - 15; Metazoa - 575; Fungi - 156; Plants - 303; Viruses - 0; Other Eukaryotes - 157 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:7621680..7623412 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61734.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.67 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 546 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIKQIFGKLP RKPSKSLQND SNGEGGVNNS YYASNSSTTS ISKPSSTSSK SSSASGSRVA NGTLAPNSMS SNRNTNQGKK PLGGDAVVQA GPFPSSGGVY 101: EALPSFRDVP ISEKPNLFIG KLSMCCVVFD FSDPSKNLKE KEIKRQTLLE LVDYVASVGF KFNDVSMQEL TKMVAVNLFR TFPSANHESK ILEIHDMDDE 201: EPSLEPAWPH VQVVYEILLR FVASPMTDAK LAKRYIDHSF VLKLLDLFDS EDQREREYLK TILHRVYGKF MVHRPYIRKA INNIFYRFIS ETEKHNGIAE 301: LLEILGSIIN GFALPLKEEH KLFLLRALIP LHKPKCSSVY HQQLSYCIVQ FVEKDFKLAD TVIRGLLKYW PVTNSSKEVM FLGELEEVLE ATQAAEFQRC 401: MVPLSRQIAR CLNSSHFQVA ERALFLWNND HIRNLITQNH KVIMPIVFPA LERNTRGHWN QAVQSLTINV RKVLCEIDQV LFDECLAKFQ VEEVNKTEVK 501: AKRERTWQRL EDLATSKTVV TNEAVLVPRF VSSVNLTTSS SESTGS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)