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AT3G21630.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : plasma membrane 18042724
TAIR : plasma membrane 17317660
TAIR : plasma membrane 18042724
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : chitin elicitor receptor kinase 1
Curator
Summary (TAIR10)
LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane.
Computational
Description (TAIR10)
chitin elicitor receptor kinase 1 (CERK1); FUNCTIONS IN: transmembrane receptor protein kinase activity, receptor signaling protein activity, kinase activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to chitin, detection of molecule of fungal origin; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 117788 Blast hits to 116484 proteins in 4898 species: Archae - 166; Bacteria - 13638; Metazoa - 43401; Fungi - 9900; Plants - 32885; Viruses - 579; Other Eukaryotes - 17219 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G21630-MONOMERBioGrid:7049EC:2.7.11.1eggNOG:COG0515eggNOG:ENOG410II96EMBL:AB019232EMBL:AB367524
EMBL:CP002686EnsemblPlants:AT3G21630EnsemblPlants:AT3G21630.1entrez:821717Gene3D:2.60.120.200Gene3D:3.10.350.10GeneID:821717
Genevisible:A8R7E6GO:GO:0002752GO:GO:0004674GO:GO:0005524GO:GO:0005622GO:GO:0005886GO:GO:0006468
GO:GO:0008061GO:GO:0009817GO:GO:0010200GO:GO:0016021GO:GO:0016301GO:GO:0019199GO:GO:0032491
GO:GO:0032499GO:GO:0035556GO:GO:0042742GO:GO:0042803GO:GO:0043621GO:GO:0045087GO:GO:0046777
GO:GO:0071219GO:GO:0071323GO:GO:2001080Gramene:AT3G21630.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF12HOGENOM:HOG000116550
InParanoid:A8R7E6InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
InterPro:IPR018392iPTMnet:A8R7E6KEGG:ath:AT3G21630KO:K13429OMA:FFFAVESPaxDb:A8R7E6PDB:4EBY
PDB:4EBZPDBsum:4EBYPDBsum:4EBZPfam:A8R7E6Pfam:PF01476Pfam:PF07714Pfscan:PS50011
PhylomeDB:A8R7E6PRIDE:A8R7E6PRO:PR:A8R7E6PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51782
ProteinModelPortal:A8R7E6Proteomes:UP000006548RefSeq:NP_566689.2scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:A8R7E6
STRING:3702.AT3G21630.1SUPFAM:SSF56112TAIR:AT3G21630tair10-symbols:CERK1tair10-symbols:LYSM RLK1TMHMM:TMhelixUniGene:At.5663
UniProt:A8R7E6
Coordinates (TAIR10) chr3:-:7615543..7618530
Molecular Weight (calculated) 67318.60 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.01
Length 617 amino acids
Sequence (TAIR10)
(BLAST)
001: MKLKISLIAP ILLLFSFFFA VESKCRTSCP LALASYYLEN GTTLSVINQN LNSSIAPYDQ INFDPILRYN SNIKDKDRIQ MGSRVLVPFP CECQPGDFLG
101: HNFSYSVRQE DTYERVAISN YANLTTMESL QARNPFPATN IPLSATLNVL VNCSCGDESV SKDFGLFVTY PLRPEDSLSS IARSSGVSAD ILQRYNPGVN
201: FNSGNGIVYV PGRDPNGAFP PFKSSKQDGV GAGVIAGIVI GVIVALLLIL FIVYYAYRKN KSKGDSFSSS IPLSTKADHA SSTSLQSGGL GGAGVSPGIA
301: AISVDKSVEF SLEELAKATD NFNLSFKIGQ GGFGAVYYAE LRGEKAAIKK MDMEASKQFL AELKVLTRVH HVNLVRLIGY CVEGSLFLVY EYVENGNLGQ
401: HLHGSGREPL PWTKRVQIAL DSARGLEYIH EHTVPVYVHR DIKSANILID QKFRAKVADF GLTKLTEVGG SATRGAMGTF GYMAPETVYG EVSAKVDVYA
501: FGVVLYELIS AKGAVVKMTE AVGEFRGLVG VFEESFKETD KEEALRKIID PRLGDSYPFD SVYKMAELGK ACTQENAQLR PSMRYIVVAL STLFSSTGNW
601: DVGNFQNEDL VSLMSGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)